Anneissia japonica (feather star): 117107808
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Entry
117107808 CDS
T08613
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117107808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajc03400
]
117107808
DNA repair and recombination proteins [BR:
ajc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117107808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
PWWP
MutS_II
MutS_IV
MUM1-like_PWWP
BUD22
Motif
Other DBs
NCBI-GeneID:
117107808
NCBI-ProteinID:
XP_033105479
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MKKPPSLISCKFLEGDVVWAKLEGFPWWPSLVCKHPTESKYYKPKRIHVQFFDDTKSRAW
ISSKFVEKFEGLGEKGFQRGGRFFSSLPEIRNWVETATEAVKKDVEERLKMIVCCPSDNE
DDDDDDEEEMDVQDEINTSNKENKSEEEDDKDDVNEISKSIKRPRRSAVAQSTKRRRIVV
ASDSDESDGDEFKPDEDELESDNESSGVDENDLSESTVDSDPETPKKSLKRKRNSKSTVS
TPGNRAVKRNFTEVIGAQKTPTAVKSSPSVSMATKSKLSSFKAVEVSSPSGPPTTEDRET
KYPHQTLEWLKDGKRKDAKGVLQGDPDYDPSTLHVPKSFLDKCTPAMRQWWEMKSKYFDS
VMFFKMGKFYELYHTDADIGVKELGIVYMKGGVAHCGFPEIAYGRYSETLIQKGYRVLRV
EQTETPSDMQERCRKMGGGATKFDKVVKREACRVTTLGTRTFSFIDGDSCDARNNYLLSV
AERPCSDTIAGGTIYGVCFIDTSIGKFHIGQFQDDRHCSRLRTLIAHYTPAQVLFERGKQ
HSQTQQILNNNLLSVLKEALAPGSQFWSAEKTLKLLVEENYLNGCGGDDGNQNVSNWPDT
LQNMVAEGDSLGLTPKEGKELALSALGACIWYLRKCCLDQELLSMKNFTTYVPVDDKEAI
EHKPRPAEFATGHRNMILDGVTLANLDILDNKLTGTTEGTLLGTMEQCCTPFGKRLFKQW
LCAPLCNPDSINDRXTVILFYCDNFLLICEQHLLCLLLLFVYLASLIRIHSLGLKRQSNS
HPDSRAIFFEDVTYSKKKIDDFLTTLSGFKSAMRVTKLFEKAKSEPKSKLLRKSITLSDS
ESKGHFPNLAKQLSFFEHAFDHKKAKQQGAIIPSPGVNQDYDTAIADLKRFKNELDVVLE
RQKKRLGCKNITYWGTGKNRFQLEIPESALSRHTPDEYELQSQKKGFKRYWTGEIKGYLE
DVIAAEDRRDAALKDSMRAVFHKFDEHYSDWKAGVQCLSVLDVLLGLASYSQMPNMCRPN
LVLPVNGDKPFIAIKEARHPCIVHTSSGDDFIPNDTYIGVAKDSSESSATGSCVLVTGPN
MGGKSTLMRQVGLVVVMAQLGCYVPAESCTLTPVDRIFTRLGASDNIMSGESTFFVELSE
TSSILQHATSHSLVLLDELGRGTATYDGTAIASAVVKELTENVGCRTLFSTHYHSLVEDF
AHDPNIQLGHMACMVENENDDDPSQETITFLYKFVSGACPKSYGFNAARLANIPDEVIRL
AKKKAADFEASSERLKLLRALNRFSTSCKLDELIEMRNAIRITE
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacctccctcactcatcagttgcaagtttttagagggtgatgttgtttgggcg
aagctggaaggatttccttggtggccaagccttgtctgtaaacatccaactgaatccaag
tattataagccaaaacgaattcatgttcaatttttcgatgatactaaaagtagagcctgg
ataagtagcaagtttgtagagaaatttgaaggtttaggcgagaaagggtttcagagggga
ggacgcttcttctcttctttgccagaaattcgaaactgggtggaaacagccactgaagca
gtgaaaaaagatgttgaggaacgactgaagatgattgtgtgttgtccgtcagataatgaa
gatgatgatgatgatgatgaagaagagatggatgtccaagatgagatcaatacaagcaat
aaagaaaataagtcggaagaagaagacgacaaggatgatgtgaatgaaataagtaaatcc
attaaaaggccgagaagatcagcagttgcacaatcaacaaagcgacgtagaattgttgtt
gcatctgatagtgatgagtctgatggtgatgagtttaaacctgatgaagacgagttagaa
tcagataatgaaagcagcggtgttgacgagaatgatctctctgaaagtacagtcgactca
gatcctgagacaccaaagaaatctttaaaacgaaaaagaaatagcaaatcaactgtatcg
acgccaggtaacagagcagttaagagaaattttacggaagtgataggagcacaaaagaca
ccaacggcagtgaagagttcgccttctgtcagcatggcaaccaagtccaaactctcttca
ttcaaagctgttgaggtttcttccccatctgggcctccaacaacagaagatagagaaacc
aaatacccacatcaaaccctagaatggttgaaagatggcaagcgaaaagatgccaaggga
gtgttgcaaggtgatccagactacgacccttccactcttcatgttccaaaatctttcctt
gataagtgtacacctgcaatgagacagtggtgggaaatgaagtccaaatactttgattct
gtcatgtttttcaagatggggaagttttatgaattatatcacacagatgcagacattggt
gtcaaagaattaggaattgtttacatgaagggtggtgtagcccattgcggcttcccagag
attgcttatggacggtacagcgaaacactgatacagaaaggataccgtgttcttcgtgtt
gagcagacggaaaccccaagtgatatgcaggagcggtgccgtaaaatgggtggtggtgca
actaaatttgataaagtggtgaagagagaagcctgtagggtgaccacgttgggaacaaga
acatttagtttcatcgacggtgattcctgtgatgcaaggaacaattatttactatcggtt
gctgaaagaccatgtagcgacaccatagctggtggaaccatttacggtgtttgttttatt
gatacgtctattggaaaattccatattggtcagtttcaagatgaccgacactgttctcgt
ctgcggacattaatagcacattatacaccggctcaggttttgtttgaaagaggaaagcaa
cattcccaaactcagcagattcttaacaacaacttgctgtctgtcctcaaagaagcactg
gcaccaggtagccagttttggtctgcagaaaaaacgttgaaactgcttgtggaagagaac
tacctcaatggttgtggtggtgatgatggaaaccagaacgtgtccaattggccagacaca
cttcagaatatggttgccgaaggagactcgcttggtttgaccccaaaagaagggaaggaa
ctcgcactaagtgcattaggtgcatgcatctggtatttgaggaaatgttgcctagatcaa
gaactcttgtccatgaaaaacttcaccacatatgttcctgtagatgataaagaagctatt
gaacataagccaagaccagcagagtttgctactgggcatagaaacatgattctagatggt
gtgacactggctaatctggacattttggataacaagcttacagggaccaccgagggaaca
ttgctaggcacaatggagcaatgctgcacaccctttgggaaacgactgttcaaacaatgg
ctatgtgcccctctatgcaaccctgactcaataaatgacaggtaaacagttattctgttt
tattgtgataattttttgcttatttgtgaacaacatctgctttgcttgttgctcttgttt
gtgtatcttgcgtctttgatcagaatacactcgcttggtttaaagaggcaaagcaacagt
catcctgatagtcgtgccatcttctttgaggatgttacctacagtaagaagaagattgat
gactttttgacgaccttatcagggttcaaaagtgccatgcgagttactaaattatttgag
aaggctaaatccgaaccaaaatccaaacttctgaggaagagtatcactttatctgactca
gaatccaagggacattttccaaatcttgccaagcagcttagtttttttgagcatgcattt
gatcacaaaaaggccaaacagcaaggggctattattccaagcccgggggtcaatcaggac
tatgatactgctattgctgatttaaagaggtttaagaatgaattggatgtcgtattggaa
cgtcaaaagaagcgactgggatgtaagaatattacgtattgggggactggaaagaatcgt
ttccaacttgaaatcccagagagtgccctctctcgtcataccccagatgagtatgagctt
cagtcgcaaaagaaaggcttcaaaagatattggactggagagattaaaggttacctggag
gacgtaatagctgcggaggatcggagagatgctgcacttaaagactcgatgagggcagta
ttccacaagtttgacgagcactacagtgactggaaagcaggtgtccagtgcctctctgtc
ctggatgtcttacttggcctagcttcttacagccagatgcctaatatgtgcagacctaat
cttgttttgcctgttaatggtgacaagccatttatagcaatcaaagaggcccgacaccca
tgtattgtacacacttcaagtggtgatgacttcattccaaatgacacctacattggtgtg
gcaaaggattccagtgaaagttcagcaacaggatcttgtgttctagtcaccggtcctaat
atgggaggcaagtctacgttgatgcggcaagtcggtctagtagtggtcatggcgcagctt
ggctgctacgttccagccgaatcctgtactctgacaccggtagatcgtatcttcaccagg
ttaggtgcaagtgacaatatcatgtcaggtgaaagtacattctttgtggagttgagtgaa
acctcatctatcctacagcatgcaacatctcactcactggtcctactagatgaacttggt
aggggtacagcgacatatgatggaacagctatagccagcgctgttgtcaaagaattgaca
gaaaacgttggatgccgtacacttttctccactcattatcattcgttggttgaagacttc
gcacatgacccaaatatacagttgggccatatggcttgcatggttgaaaatgaaaatgat
gatgacccaagtcaggagacgataacgttcttgtacaagtttgtgagtggagcgtgtcca
aagagctatggtttcaacgcagctaggctagcaaatatacctgatgaagttattagattg
gccaagaagaaagctgcagattttgaagcatcttctgaacgcctcaagctactgagggcg
ctaaacagattctcaacatcatgtaaactagatgagttaatagaaatgagaaatgcgatc
agaataacagaatga
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