Anneissia japonica (feather star): 117108778
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Entry
117108778 CDS
T08613
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117108778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117108778
03009 Ribosome biogenesis [BR:
ajc03009
]
117108778
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117108778
Spliceosome [BR:
ajc03041
]
Complex A
U2 snRNP components
U2 related factors
117108778
Complex B
117108778
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117108778
Ribosome biogenesis [BR:
ajc03009
]
Eukaryotic type
90S particles
Helicases
117108778
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Cas3-like_C_2
nSTAND_NTPase5
Flavi_DEAD
ABC_tran
PhoH
AAA_25
Motif
Other DBs
NCBI-GeneID:
117108778
NCBI-ProteinID:
XP_033106821
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MSKRHRLDIGDCSTSSKKHSNENDRKDRSKDGDRNSSRTLTSAPTKLPPMKQMAINPFTG
LPFTPRYHTILAKRIQLPVFEYKEKFMEMLDKYQVTVLVGETGSGKTTQIPQWCLEYVRV
KYALANKKGVACTQPRRVAAMSVAQRVADEMDIMIGNEVGYSIRFEDCTSNKTILKYMTD
GMLLREAMTDPLLERYGVILLDEAHERTLATDILMGLLKEVEKQRPDLKIVVMSATLDAG
KFQSYFSNAPLMTVPGRTHPVEIFYTPKPERDYLEAAVRTVVQIHVCEEIEGDILLFLTG
QEEIEECCKRMKREIDTLGPEVGELKSIPLYSTLPPQQQQRIFEAAPPKKANGAIGRKVV
VSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKP
GKCFRLYTEKAYESEMQSNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMR
ALELLNYLSALDDNGDLTELGSMMAEFPLDPQLAKMVIASAQYNCSNEILSVTAMLSVPQ
CFVRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQSNDDPQWCYDNFIQYRSMKSAD
NVRQQLARIMDRFAVKRTSTDFNSKDYYMNIRKALVSGFFMQVAHLERTGHYLTVKDNQV
VQLHPSTCLDHKPEWVLYNEFVLTTKNYIRTVTDIKPDWLIRNAAQYYNMENFPQCEAKR
VLERLIAKLQAREYASSTQA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgacaccgtttagacattggggattgttcaacatcctctaagaagcattcg
aatgagaatgacaggaaggacagaagtaaagatggtgaccgaaacagctctcgtacatta
acatcagctcccacaaagcttccaccgatgaagcaaatggctattaatcccttcacaggc
ctaccatttacaccacgctatcacacaatcctggccaaaaggatccaactacctgtgttc
gagtacaaagaaaagtttatggaaatgttagataagtaccaagtcactgtactggttggt
gaaactggttcaggtaaaacaacacagattcctcagtggtgtctagaatacgtacgcgtg
aagtatgcattggcaaacaaaaagggagtggcatgtacacagccacgacgagtagcggct
atgagcgtcgcacagcgtgtggctgatgagatggacataatgattggtaatgaagttggt
tacagtatacgattcgaggactgcactagtaacaagacaattcttaaatacatgacagat
ggtatgttgctacgtgaagcaatgactgacccgctgttagaacgttatggtgttatcttg
cttgatgaggctcacgaacgtacactagctacggacatcctaatgggtctgctgaaggag
gtagagaagcaacggcccgatttaaaaattgttgttatgagcgccactcttgatgctggc
aaatttcaatcttacttctcaaatgctcctctcatgactgttcctggtcgtacacatcca
gtcgaaatattctacacccccaaacctgagagggactatctggaagccgctgtgcgcact
gttgtccagattcatgtatgtgaagaaattgaaggcgacatccttttgtttctcacaggt
caagaggaaattgaagagtgttgcaaacgtatgaagcgtgaaattgatactctaggccca
gaggtaggggagcttaagtcgattcccctgtactcaacacttccccctcaacaacaacaa
agaatctttgaggctgccccgccaaagaaggcgaacggagccatcggtagaaaagttgta
gtctctaccaacattgcagaaacatccctgacaatcgatggtgttgtgtttgtcatagat
ccaggatttgcgaagcagaaggtatacaacccacgtattcgagttgagtcgctgcttgtc
tctcccattagtaaagccagtgcccaacagagagcgggtcgtgctggccgtaccaaacca
ggaaagtgtttccgcctttacacagagaaggcctacgagagtgagatgcagagcaacaca
tacccagaaattttaagatccaacctgggaacagttgtactgcaactgaaaaaacttgga
attgatgatcttgtgcattttgacttcatggacccaccagcaccagagacactgatgagg
gctcttgaacttctgaactacttaagtgcattggatgataatggtgatctgacggagtta
ggctcgatgatggcagagttccctcttgatcctcaactggccaagatggtgatcgctagc
gcccagtacaattgctcaaacgaaatcttatcagtcactgccatgttatcagttccacag
tgttttgtacgaccaaacgaggcgaagaaagctgcagatgatgcaaagatgaggtttgca
catattgacggtgaccacctgacccttctgaacgtttaccatgcatttaaacaaagtaat
gacgatcctcagtggtgttatgacaacttcatccagtatcgttccatgaagtcagcagac
aatgtacggcagcagcttgcgagaatcatggaccggtttgcagtgaaacggactagtaca
gacttcaatagcaaggactattacatgaacattcgcaaagcgcttgtctcagggtttttt
atgcaggtagcacatcttgaaaggactggacattacctgaccgtaaaggacaaccaggtt
gttcagcttcatccttctacttgtcttgaccataagccagaatgggtgttgtacaacgag
tttgtattaacaaccaagaactacatccgtacagtaacagatatcaaacctgactggctg
atccgcaatgctgcacaatactacaacatggagaacttcccacaatgcgaggccaagagg
gttttggagaggttgatagctaagctgcaagctcgagagtatgcaagctcgacacaagca
tga
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