Anneissia japonica (feather star): 117108892
Help
Entry
117108892 CDS
T08613
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
ajc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117108892
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117108892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117108892
04121 Ubiquitin system [BR:
ajc04121
]
117108892
03400 DNA repair and recombination proteins [BR:
ajc03400
]
117108892
Enzymes [BR:
ajc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117108892
Spliceosome [BR:
ajc03041
]
Complex B
Other components
Prp19 complex
117108892
Complex C
Prp19-CDC5 complex
117108892
Ubiquitin system [BR:
ajc04121
]
Ubiquitin ligases (E3)
U-box type E3
117108892
DNA repair and recombination proteins [BR:
ajc03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
117108892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Prp19
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
NBCH_WD40
U-box
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
PROPPIN
Beta-prop_DCAF4
Tricorn_N
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_NOL10_N
PAS_11
zf-Nse
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
117108892
NCBI-ProteinID:
XP_033106958
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MALVCSISHEVPEHPVVSPVSNNIFERRLIEKFIAENGVDPITGEVLSEDMLVDVKVSPV
VKPRPPTATSIPAILKLLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAAPGIAPIGSMVPPSQLAEPMEAEEAGMIGMSEEVIQKLQDKA
ALLTAERKKRGKKVPEDLMPAEEIRSFRVQSSHPGLHSASNPGILALDIQAANTNKVLTG
GADRNVVVFNKETEQLETILKGHTKKVTHVIYHPNKDVVFSSSPDSTIRVWAVASGTCAQ
TIRAHEGAVTGLSLHATGDYMLSCSEDRHWAFSDINVGRVLTKVSDDSIGHALTCAQFHP
DGLIFGTGTGDSVIKIWDLKERTNVANFPGHSGPITAISFSENGYYLATAADDSVVKLWD
LRKLKNFKNITLDSHYEVKSLSFDQSGTYLAVAGSDVRVYLCKQWQELAVLTDHNGLATG
VRFGQHAGFLASTGMDRSLKFYGL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgtttgctccataagtcatgaagtgcctgagcatccagtggtatcgcccgtt
tctaacaatatttttgaacgacgtctaattgaaaaattcatagctgaaaatggagttgac
cctattactggagaagttctctctgaagatatgctggttgatgttaaagtgagccctgta
gtaaagccacgcccaccaacagccaccagtatccctgcaatcctcaagctacttcaggat
gagtgggacgcctgcatgctgcatagcttcaccctccgtcaacagttgcaaacagcccgt
caagaactctcccacgccctctatcagcatgatgctgcatgtcgtgttattgctaggctg
actaaggaggttacagcagcccgtgaagcacttgctactctgaagccccaggctgctcca
ggcattgcccctattggcagcatggtcccacccagtcagctggctgagccaatggaagca
gaggaggcaggcatgattggcatgtctgaagaagtcatccaaaagttgcaagacaaggct
gccttgcttactgcagagcgtaagaagcgtggtaagaaggttccagaagatcttatgcca
gctgaagagatccgtagttttcgtgttcaatcttctcatccaggtcttcatagtgcaagt
aatcctggtattttggctttggacatccaagctgctaacactaacaaggtactgactggt
ggtgctgaccgcaatgtggtggtcttcaataaggagactgagcaattggagaccatactt
aaaggacatactaagaaggttactcatgtcatctaccatcccaacaaggatgttgtgttc
tcatcttctcccgattctacgatccgtgtttgggcagttgccagtggcacatgtgcccag
acgattcgggctcacgaaggtgcagtaacagggcttagtctccatgctactggtgactac
atgctgagttgctctgaggatcgtcactgggctttctctgatatcaacgttggacgtgtc
cttaccaaagtgtctgatgactctattggtcatgctttgacttgtgctcagttccatcct
gatggtctgatcttcggaactggtactggtgacagtgtcatcaagatctgggatctcaag
gaacggacaaatgtggccaactttccaggacattctggacccatcactgccatttccttc
tctgagaatggttactatctggctactgctgctgatgactccgttgtcaaactctgggat
ttgcgaaagttgaaaaacttcaaaaacattactttagatagtcattatgaggtgaagtca
ttgtcatttgatcagagtggtacctacctagcagtggctggttctgatgttcgtgtttac
ttgtgtaagcagtggcaagaacttgctgtgctcactgaccacaacggtttagctactggt
gttcgatttggtcagcatgcaggtttccttgcttcaactggaatggacaggagtctcaag
ttctatggcttgtaa
DBGET
integrated database retrieval system
