Anneissia japonica (feather star): 117109317
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Entry
117109317 CDS
T08613
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K06237
collagen type IV alpha
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc04512
ECM-receptor interaction
ajc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117109317
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117109317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ajc04147
]
117109317
00536 Glycosaminoglycan binding proteins [BR:
ajc00536
]
117109317
Exosome [BR:
ajc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117109317
Glycosaminoglycan binding proteins [BR:
ajc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117109317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117109317
NCBI-ProteinID:
XP_033107480
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MKIRKVATISVLIFAVIIELATAAACVGCQGAPRCICNGTKGDRGPRGTTGQVGNTGVPG
YPGPEGPQGSRGINGQKGNQGDTGPKGIRGTQGQPGYPGYPGLPGDSGVDGPPGEPGVPG
CNGTKGEPGQPGGPGQSTQGDPGQAGLPGPKGDRGLPGNALKGVKGSLGPKGDEGSKGEP
GLDGMKGTKGERGYEGRKGGRGDSGSQGQKGEMGVSFRGANGEKGQKGEPGPKECDQVEP
PTGDIKFIPGPPGDKGDQGEKGMLGPVGPPGSMGPRGFDGTKGLKGMPGEAGAVGKRGKP
GVDGEQGDFGEKGEQGLPGQTGRDGRSGEKGQKGDRGRIGFQGPPGEVIVVNASYKAEKG
ERGPQGREGEAGFPGQPGDEGIRGLPGAIGNVGPRGDPGQKGEPGLIGVGQKGEPGRPGL
DGMDGMPGPIGDKGFPGDRGNPGVPGISMKGDKGMDGAIGQPGNPGPRGPRGPSGDIGPK
GEPGDYTGAVGPKGNQGYRGPQGEPGDPGVRGQDGSKGSEGLKGEPCGGCSPGNPGPKGS
DGIQGPQGRVGPPGAKGEAGDMGPRGDPGPAGRNGATGSKGDVGPQGAAGAVGSRGRTGA
KGELGKPGPAGNRGMKGSDGQKGEKGLPGEAPNQFLQGEKGSKGDMGPQGSTGPPGLTGR
VGPPGIAGDQGFGDQGQKGESGVKGSLGQKGDRGFPGERVVVKGCIAGQKGDRGPPGNKG
EEGARGPQGLRGNQGEKGDIGLPGDRGPAGPRGNPGASTIGPIGLKGGQGPQGERGVPGS
PGPMGSPGENGRFGDKGSKGAKGNEGPPGPEGPKGFQGQPGAPGLRGEQGPTGEAGAPGI
NGIPGRSIKGEKGEVSICVDGAPGESIPGDRGLTGIRGIKGDDGAQGAPGQKGETGAPGL
SSQKGDPGPRGIPGAKGFPGRSGTNGIPGVKGSQGSKGDKGSIGPAGLKGSMGSSGRIGT
DGPPGQKGAKGNIGMPGNNGLPGSKGQVGPKGSNGIPGAPGFTGSPGEKGDRGERGVSGP
PGPRGRDGNSGEVGETGVPGIDGAPGPQGERGIPGEKGDNGTPGLPGLRGPPGPRGAPGA
EGNEGVKGDRGVRGQDGGPGLQGQPGEKGVKGMIGIPGATGLNGSPGLNGVNGNPGGPGE
KGEPGFGRPGQKGERGPRGQKGAPGRNGGSGVKGDKGDAGIPGTPGSEGPMGPIGPTGTK
GARGPSGEDGAEGEKGEKGLRGLLGRPGRDGNPGLDGRPGSKGQPGRIGPEGRDGIDGVP
GPRGQKGFPGQRGEKGRPGLDALPCSAQKGDKGERGPNGQNGNPGPKGSDGLIGLPGDIG
QKGEVGRPGIGIKGDTGSRGVPGTSGSVGDKGDKGVEGPRGNPGFPCSKGEPGAPGPSGP
PGQLGRRGNPGQEGPRGNPGIKGIKGNTGFPGPIGVRGLTGDPGPPGTSGLPGQKGETGF
SGLRGPPGQTGLKGDKGSAGFPGSRGPIGLEGIKGSQGRDGQPGPGAPPAGFYLTRHSQT
IQVPTCPAGTTKMWDGYSFLYAQGNERAHGQDLGQPGSCLRRFSTMPFLFCNIQNTCNFA
NRNDYSYWLSTNQPMPMDMAPIKANAMRPFVSRCSVCEATAQTLAVHSQTVAVPDCPAGW
RELWIGYSFVMHTGAGAEGSGQSLASPGSCLEEFRPSPFIECHGDGKCNYYATTYSFWLA
TIDRNGQFTKPSSETLKQNQVERVGRCKVCSRDPLTT
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaggaaagtagcgacgatcagcgttctcatttttgccgtgatcatcgaattg
gctaccgccgcggcttgtgttggttgtcaaggagctccaagatgtatatgcaatggaacg
aaaggtgataggggtccacgtggaacaacagggcaggtaggaaatacaggtgttccaggg
tacccagggccagaaggaccacaaggatcaagaggaattaacggtcaaaaaggcaaccaa
ggtgatacaggacccaaaggaatcagggggacgcaaggacaaccaggatatcctggttac
ccagggttgccaggcgactcaggtgtagatgggccaccgggggaacctggtgtcccagga
tgtaacggaaccaagggagaaccaggacaaccaggaggaccaggacagagcacacaaggt
gatcccggacaggcagggctcccggggccaaagggagatcgaggacttccaggcaatgct
ctaaagggagttaaaggcagcctcggcccaaaaggagatgaaggctctaagggagagcct
ggactggatggaatgaaaggcacgaaaggtgaacgaggatatgaaggaagaaagggaggt
agaggagacagtggttctcaaggacagaaaggcgaaatgggagtcagttttcgaggtgct
aatggtgaaaagggtcaaaaaggagaaccgggaccgaaggaatgtgatcaagtagaacca
ccaactggtgatataaaatttatacctggtccaccaggggataagggtgaccaaggtgaa
aagggaatgctaggcccagttggaccaccaggaagtatgggtcctcgtggatttgacggg
acaaagggcctaaagggaatgccaggcgaagcaggagctgttgggaagaggggtaagcca
ggtgtagatggagagcagggagattttggtgaaaagggtgagcaaggtttgcctggtcag
actggccgtgatggacgcagtggggaaaaaggacaaaaaggagatagagggcgtataggt
tttcaaggacccccgggagaagtaattgttgtgaacgccagctacaaggctgagaaaggt
gaaaggggaccacaggggcgtgaaggagaagctggatttccggggcagcctggagacgaa
ggaataagaggtctacctggagctattggaaatgttggacctaggggtgatcccggtcaa
aagggagagccaggcctaattggtgttggacaaaagggagagcctggacggccaggtctt
gatggaatggatggtatgccaggaccaattggagacaaaggatttccaggtgatagaggt
aatccaggagttcctggcatatccatgaaaggagacaaaggtatggatggagctattggc
caacctggaaaccctggtccaagaggacccagaggaccatcgggagatattggaccaaag
ggtgagcctggtgactacacaggagcagtagggcctaaaggaaaccaggggtacagaggc
ccacaaggtgaacctggtgaccctggagtaagaggacaagatggaagcaaaggttcagaa
ggtctaaagggagaaccatgcggcggatgcagtcctggaaatccaggtcccaagggcagt
gatggtatacaaggccctcagggaagagtgggtcctcctggagcaaagggagaagcagga
gacatggggccaagaggagatcctggacctgctggccgtaatggagctactggaagtaaa
ggtgatgtaggtcctcaaggggcagcaggagcagttggaagtcgcggtcgtacaggagca
aaaggggaactgggaaaaccaggtcctgcaggaaatagggggatgaagggtagtgatggt
caaaagggtgaaaagggattaccaggagaggcaccaaatcaatttctacaaggtgaaaaa
ggtagtaaaggtgatatgggacctcaaggaagtacaggaccaccaggattaacaggaaga
gttgggcccccaggtatagcaggagatcaaggttttggagaccagggacagaaaggagaa
tcaggtgtaaagggatctttaggacaaaagggtgatagaggattccctggtgaacgtgta
gttgtaaaaggatgtattgctggccagaagggtgatcgagggccccctggcaacaaagga
gaagaaggagcacgaggaccacaagggcttcgtggtaaccaaggtgaaaaaggtgatatc
ggtttaccaggtgacaggggaccagctggcccacgtggaaacccaggtgcatctactata
ggaccaataggtcttaagggtggccaaggtccacaaggtgagagaggtgtgcctggcagt
ccagggccaatgggaagtccaggtgaaaatggacgctttggagataagggatcaaaggga
gctaaaggaaacgaaggtccacctgggccagagggaccaaagggatttcaagggcaacct
ggtgcccctggattgaggggagaacagggtccgacaggagaagctggcgcacctggtatt
aatggaatacctggtagatctatcaaaggtgaaaaaggtgaagttagcatttgcgttgat
ggtgcacctggcgaaagtataccaggagatagaggtttgacaggcatacgaggaattaaa
ggggacgatggagctcaaggtgcaccaggacaaaagggtgagacaggtgccccaggtcta
agtagccaaaagggagatcccggaccacggggcattccaggggcgaaagggttccctggg
cgatcaggtacaaatggcataccaggtgttaaaggctcccaaggatcaaaaggtgataaa
ggttccatcggtcctgctggtctgaagggcagtatgggatcttcagggcgaataggaact
gacggaccacctggacaaaaaggagcgaagggtaacattggaatgccgggaaataatggt
cttcctggatcgaaaggtcaagttgggcctaaaggatcaaacggcatcccaggagcgcct
ggatttaccggaagtccaggagaaaaaggagacagaggagaaagaggagttagtggtccc
cctggtcctcgtggtagagatggtaatagtggtgaagtaggagaaaccggtgtaccaggc
attgatggagcaccaggccctcaaggagagagaggcatacctggtgaaaaaggtgataat
ggcactccagggttgcctggtttacgtggtcctccaggccctcgtggagccccaggcgct
gaaggaaatgagggagtgaaaggtgatagaggggtcagaggtcaggatggagggccagga
cttcaaggacagccaggtgagaaaggtgtgaagggaatgattggcataccaggtgcaact
gggttaaatggctcaccgggacttaatggtgtaaatggaaatccaggtgggcccggtgaa
aaaggtgagcccggttttggacgtccgggacagaaaggagagcgaggtccacgtggacaa
aaaggtgctccaggacgtaatggtggaagtggggttaaaggtgataaaggtgatgccggg
atcccaggtactccaggcagtgaaggcccaatgggtccaattggacctacggggactaaa
ggagcacgaggcccctcgggagaagatggagcagaaggtgagaaaggtgaaaaaggtctg
cgaggactgcttggaagaccaggtagagatggaaatcctgggcttgatgggagaccaggc
agtaaaggacaacctggaagaattggacctgagggaagagatggcattgatggagtacca
ggaccaagaggacagaaaggtttccctgggcaacgtggagagaagggtagacctggatta
gatgcattaccatgctcagcacaaaagggtgataaaggcgaacgaggcccaaatggtcaa
aacggaaaccctggaccaaaaggctcagatggtcttattggtctaccaggagacattggc
cagaagggtgaagttggccgcccaggcattggaattaagggagacacaggttcaagaggt
gttccgggtacatctggtagtgttggagataagggagacaagggagtggaaggtcccaga
ggaaacccaggctttccatgtagcaagggagaacctggagcaccgggtccaagtggtcct
cctgggcaacttggacgtcgaggaaatccaggacaagaaggaccaagaggaaatccaggt
attaaaggaatcaagggaaacactggtttcccaggtcctataggagtccgtggtctaact
ggagatcctggtcctccaggtacctctggattgcctggacaaaagggagaaactgggttc
agtgggttacgtggaccaccaggacaaactgggctaaagggagacaaaggaagtgcagga
ttccctggttcaagaggacctataggccttgaagggatcaagggttcacaaggacgtgat
ggacaacctggcccaggagccccacctgccggattctacttgacgaggcatagtcagacc
atccaggtgcccacgtgtccagctggtaccaccaagatgtgggatggttacagcttcttg
tatgcacagggaaatgaacgcgcccatggccaagatttaggtcaaccaggctcttgcctt
aggagatttagtacaatgccattcttgttctgtaacatccaaaacacctgtaactttgcc
aaccgtaatgactactcctattggctctcaaccaaccaacccatgcctatggatatggcc
cccatcaaagctaatgccatgcgtccattcgtaagccgttgcagtgtatgcgaggccaca
gctcaaacgttagcggtgcacagtcaaacagttgctgtacctgattgtccagccggctgg
agagaactctggattggttatagttttgttatgcatactggcgcaggagctgaaggttct
ggacaatcgctggcatctcccggctcctgcttagaagaattccgcccatcaccatttatt
gaatgccacggtgatggcaaatgcaactactatgccacaacatacagtttctggctggcc
accatcgaccgcaatggacagttcactaagccaagctctgagacccttaaacaaaaccaa
gtagagcgtgttggtagatgtaaagtgtgcagcagagacccattaacaacataa
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integrated database retrieval system