Anneissia japonica (feather star): 117111061
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Entry
117111061 CDS
T08613
Name
(RefSeq) helicase SKI2W-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117111061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117111061
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117111061
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117111061
mRNA degradation factors
3'-5' decay
Ski complex
117111061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
MTR4_beta-barrel
Helicase_C
DEXQc_Suv3
ResIII
ATPase_2
MTR4-like_stalk
nSTAND3
AAA_22
Ski2_beta-barrel
PIN_5
Motif
Other DBs
NCBI-GeneID:
117111061
NCBI-ProteinID:
XP_033109837
LinkDB
All DBs
Position
Unknown
AA seq
786 aa
AA seq
DB search
MKSTQIVISFSYTDHSNKQKQASGLTMDEPSSSQERESSQPPQAVMVNTSVENFTQEVPE
MAHEWEFELDVFQKQAILHLEKKRNVFVSAHTSAGKTVVAEYAIALSRKHGTKAIYTSPI
KALSNQKYRDFKNVFGSDYVGLQTGDVQLNESASCVIMTTEILRSKLYDQDLSDLECVII
DEVQYIGDKVRGVVWEEVLIMLPDTVKLVLLSATFWNTMEFANWIVKIKKQSVYVICTEK
RPVPLHHYIYTGTQDFQENQLFEIVDGLGNFNNRNYRQAWAEYENQKRAGLRKVKQKNQY
LPFVRILLHPLQYLPAIVFTFSRAKCRDNALTLQAVDLTERNEKSEIQVFLTTSLEALSD
SNMQLVQIMELREMLERGIAYHHSGVLPRMKEIVEHLFQRGLVKVLFATETFASGVNMPA
RTVIFDSINEKFDGEKKRTVNSAEYIQMAGRAGRRGKDSCGFSIILCGDRVPKASILRSL
QQGKPCPVESQFHLKDTMILNLLNRAKFGVQDILRKSFAEYSRDSTEKELLALKQKLNDM
EPVPCDLCKEDLEQYYDTCKRIHTLRSDLQSESIMDPEALPIGRIVVVNSEKHKNHFGII
ISNVNTDSNMVKAVVICSKKASTGEPKTELKVPMILKTEVFLPTSDFSHCSEVVEFDTDD
FTITNLVVAIPEELAQSSVSSTMLTKKVVQMMCRLRTKDIPLFIPQTVSQEFIFKFKERE
DLEKQIFGYKCLQCKHLTKHYEIVENQKILEEKIAEVEEQLSQRHLLLLPQFEQRQKVFK
HIVFKK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtacccagattgtcatctcattttcatacacagaccactccaataaacagaaa
caagcttctggattgacaatggatgaaccatcatccagtcaagaaagagagtcatctcag
ccacctcaggcagttatggtaaacacatctgttgaaaacttcacacaggaagttcctgaa
atggcacatgagtgggaatttgagttggatgtgtttcagaagcaagctatactccatctg
gaaaagaaacgcaatgtgtttgtatcagctcacacatcagctgggaaaacagttgttgcg
gaatatgctatagctctctctcgcaaacatggtaccaaggcaatatatacatcaccaatc
aaggcattgtccaaccagaagtatcgggatttcaagaatgtatttggttctgattatgtt
ggcctgcagacgggagatgtccaattgaatgaaagtgcttcctgtgtcatcatgacaact
gaaattctaaggtcaaaactgtatgatcaggatctcagtgatctggaatgtgttatcatc
gatgaagtacaatacattggtgataaagtgagaggagtcgtttgggaggaggttctaatc
atgctaccagatactgtaaaactggttcttctgagtgcaacattctggaacactatggaa
tttgctaattggatcgtgaagataaaaaaacaatcagtgtatgtaatttgtactgaaaaa
cgacccgtgcctcttcatcattacatttatactggaactcaggacttccaagaaaaccaa
ctgtttgaaattgtagatgggttaggaaatttcaacaatagaaactatcgacaagcgtgg
gctgagtatgaaaaccaaaagagagcaggcttacgaaaagtaaagcaaaaaaatcagtat
ctgccatttgtcagaattctactacacccgttacagtatttaccagcaattgtgtttaca
ttttcgagagcaaaatgcagagataatgcgctgactttacaggctgttgacctgacagaa
cgaaatgagaaaagtgaaattcaagtttttttaaccacatctttggaagccctgtcagat
tcaaacatgcaattagtccagattatggagttgagggagatgctggagaggggcatagct
tatcaccacagcggagtcttacctcgtatgaaggaaattgtggaacatctgttccaaagg
ggtcttgtgaaggtcctgtttgctacagagacatttgctagtggtgtgaatatgccagca
aggactgtgatctttgactccattaatgaaaagtttgatggagagaagaaacgtactgtt
aattcagccgaatacattcagatggctggcagagcaggtagaagaggcaaagattcatgt
ggtttctctattattctatgtggagatcgcgttccaaaggcttcaatattaagaagttta
caacaagggaagccttgtcctgtggaatcacaatttcacctcaaggatactatgatcctg
aatctacttaatagggctaagtttggagtacaggatattctgaggaaaagttttgcagag
tatagcagagattctacggaaaaagaacttctagctttgaagcagaagttaaatgacatg
gaacctgtaccttgtgacttgtgcaaagaggatctggaacagtactatgacacatgcaaa
aggattcatacgttaagatctgatttacagtctgaatctattatggatcctgaggcacta
ccaattggtcgaattgttgttgtcaattcagaaaaacacaagaatcattttgggatcatc
atatctaacgttaacacagattcaaatatggtcaaagctgttgtgatatgtagtaaaaaa
gcgtctacgggggaaccaaaaacagagctaaaagttcctatgattttaaagacggaagtg
tttctgccaacgagtgacttcagccattgctctgaagttgtagagtttgatactgatgat
tttaccataacaaatcttgtagttgctataccagaagaacttgctcaatcaagtgtatct
tccactatgctcactaaaaaagttgtccagatgatgtgtaggttacgcacaaaggatatt
cccttgttcattcctcagactgtttcacaggaatttattttcaaatttaaagagagagag
gatctagaaaagcagatttttggatataaatgccttcagtgtaaacacttaactaaacat
tatgaaattgttgaaaatcagaaaatactggaggagaaaatagcagaagttgaagaacag
ctctctcagagacacttgcttctgcttccacagtttgaacaaagacagaaggtatttaaa
catatagtatttaaaaaataa
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integrated database retrieval system
