Anneissia japonica (feather star): 117111235
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Entry
117111235 CDS
T08613
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117111235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117111235
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117111235
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
117111235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PMT_C3
Motif
Other DBs
NCBI-GeneID:
117111235
NCBI-ProteinID:
XP_033110029
LinkDB
All DBs
Position
Unknown
AA seq
292 aa
AA seq
DB search
MASVSLSEAEKTFIIHGIQDDLRCDGRECETYRLIELECGLVSNCSGSAKLKLSNTDILV
GIKAEMGTPKTYLPDKGYMEFFVDCSATASPKFDGRGGEDLASEIATTMSRMYGSAETLN
LEDLCILPGECCWVLYVDVVVLECGGNLFDAVSLCIKAALADARIPKVTVQMDDEGNQEM
DVSDDPHDCYRFKPEMMPLLVTVNKVNQKHIIDATIEEEACSLACIMISVMPKTGKITSI
VKKGSGSLDPDSTTDMIQCGKRVADLLHSNLMDTLNAIEKSGSKVEKVGFLA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgtttcgttaagtgaggcagagaaaacgtttattattcacggaatccaggat
gatttacgttgtgatggacgagaatgtgaaacataccggttgatagagcttgagtgtggt
cttgtctccaactgcagcgggtcggcaaaactcaagctttctaacacagatattcttgtc
gggattaaagcagaaatgggtactccaaaaacctacttaccagataagggttatatggag
ttttttgtagactgttcagcaacagcttctcccaaatttgatggtagaggaggtgaggat
ctagcctccgagatagctaccaccatgtcaaggatgtatggaagtgctgagactctaaac
ctggaagacttatgcatattacccggcgagtgttgctgggttttgtacgttgatgtggtg
gtgttggagtgtggtggtaacttatttgatgcagtgtcgctgtgtatcaaggctgcatta
gctgatgctagaattccaaaggtaacagtacagatggatgatgagggcaaccaagagatg
gatgtgtctgatgatccacacgactgctatcgcttcaaaccggagatgatgcccctgctg
gttactgtaaataaggtaaaccagaaacatattattgatgctacaattgaggaggaggct
tgcagcctggcctgcatcatgataagtgtgatgccgaagactggaaaaattacctccatt
gtcaagaaaggctcaggaagcctggatcctgacagtacaacagatatgattcaatgcgga
aaacgtgtggcagatctactgcacagtaatctaatggacaccttaaatgcaattgaaaag
tctggcagtaaagttgaaaaagttggcttcttagcttaa
DBGET
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