Anneissia japonica (feather star): 117111439
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Entry
117111439 CDS
T08613
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117111439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117111439
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117111439
Spliceosome [BR:
ajc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
117111439
Complex B
117111439
Complex C
U2 SnRNP specific factors
117111439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117111439
NCBI-ProteinID:
XP_033110250
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MYRGGSGSQPREPSMGSSYNNVRPPGYAGIAQIEKATRLVKRHRSEQDYFDDSDPEESAA
PTGGDDSDEEDPLDAFMAGIQEEIRNESEKPKEKTKKAKRQDIEEFDEMEEYMQYMRDNP
TAGLNAPMDDDDLIEYDADGNPIIPEKSRIIDPLPSIDHSEIYYDAFNKNFYEEHADIAR
LSYLDVMDLRKKLGIKVSGADPAKPVSSFAHFGFDEQLMHYIRKSEFSSPTPIXXQGIPI
AMGGRDMIGIAKTGSGKTAAFIWPLLIHIMDQKELQPGDGPIGLICAPTRELSQQIYIEC
KKFGKAYNIKVVCAYGGGNMWEQTKACQEGAEIIVCTPGRMIDLIKKKATNFQRVSFLVF
DEADRMFDMGFEPQVRSIANHVRPDRQTLLFSATFRRKIEKLARDILIDPVRVVQGDVGE
ANQDVEQIVQLFQEDYQKWKWLTSKLVSFMTVGSVLIFVTKKVNAEELAANLGKQDFIVG
LLHGDMDQGSRNKVISGFKRKEFAVMVATDVAARGLDIPSIKTVINYDVARDIDTHTHRI
GRTGRAGEKGTAFTLMTSKDVHFAGDLVRNLEGANQSVPSEVMELAMQNNRFRKSRFKGG
RGKRLNQGGGGLGYRERPGLGSSDGDDATEAKDQSGDLEPPTAKTNATGPLGERFGGGVT
EGLYSSRLAAMKTSFSAQFKSQFQAASSASASSTWGGKKGMVIPPKIDTTVQKINTPAAM
PPPSFIPPSKISGFISSVRNETTKTESDRYEKRDRRRSRDDDRYDDRHDDRHERRRNYDD
DRHDYRRDDERREDRNRHNRGRDRSDRDRRDTHDRGSTGSRSHSHDSERRHDDRSSRRNS
HDSGSRRHSSEDESSKSISSTPEILSQSITTNIASPEVSQVAYPVPSMTMKQLVAKASRW
DSTGDSGIKTSSGDNNSNSMLPPTDMPPPVKKVRKSRWDT
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtaccggggaggttcaggcagccaaccaagggagcctagtatggggagtagttacaac
aatgttaggcccccaggatatgcaggcattgcacagattgagaaagccacaaggctggta
aaacgacaccgttcagagcaagattattttgatgacagtgatccagaagagagcgcagct
cccaccggaggagacgacagtgatgaagaagaccctttggatgcctttatggcaggcata
caggaagaaatcagaaatgagtctgaaaaaccaaaagagaagacaaaaaaagcaaagcgg
caagatattgaagaatttgatgaaatggaagaatacatgcagtacatgagagataatcct
accgcaggattaaatgcgccaatggatgatgatgatctcatagagtatgatgccgatggc
aatcctatcattcccgaaaagtccagaatcatagacccgttaccgagcattgatcattct
gagatttattatgacgcatttaataagaatttttatgaggagcatgctgacattgctagg
ctgtcatatcttgatgtaatggatcttaggaagaagctagggattaaggtgtcaggagca
gatcctgctaaacctgtctccagctttgctcattttgggtttgatgagcaattaatgcat
tatatcagaaaatcagagttttcatcaccaacacctatccanngacagggtattcccata
gcaatgggtggacgcgatatgattggtattgccaagactggtagtgggaaaacggcagca
tttatctggcctctgcttatacacatcatggatcagaaagagctacagcctggcgatggt
ccaattggtttgatttgtgccccaacacgagagctgtcccagcagatatatattgaatgt
aaaaagtttggaaaagcttacaatataaaggttgtatgtgcttatggaggaggaaatatg
tgggaacaaacaaaagcatgtcaagaaggtgcagagatcattgtttgtacaccaggtcgt
atgattgatctcatcaagaagaaagcaaccaattttcagcgagtttcatttctcgtattt
gatgaggctgataggatgtttgacatgggctttgagccccaagtgcgctcaattgctaat
catgtcagaccagatcggcaaacattgttgtttagtgcaacattcagaagaaagatagag
aagctagcaagggacattttaatagatcctgtgcgagtggtacagggtgacgttggggag
gcaaatcaagatgtagagcagatagtgcagttgttccaggaggattaccagaagtggaag
tggttgacatccaagctggtgagctttatgactgttggaagtgttttaatctttgttaca
aagaaagtcaatgcagaggaattggcagcgaacttaggaaagcaagactttatagttggg
ctgttgcatggtgatatggatcagggcagtagaaataaggtgatcagtggtttcaaacga
aaagagtttgcagtaatggtagcaacagacgttgcagcacgtggcttggacatcccctcc
attaagaccgtcataaattatgatgttgcgagagacattgacactcatactcaccggatt
ggtcgaacaggtcgagcaggtgagaaaggcacagcatttacccttatgacaagtaaagat
gttcattttgctggtgatcttgtacggaacttagagggagctaatcaatcagtgccatct
gaggtgatggaactagcaatgcagaacaatcgctttcgaaagtcgcgattcaaaggtgga
cgtggtaaacgtctcaatcagggcggtggtggacttgggtatcgtgaacgccctggtctc
ggcagctcggacggtgatgatgcaacagaggccaaagatcagtcaggtgatttagagcca
cctactgcgaagacaaatgcgacaggaccactgggagaaaggtttgggggtggtgtcaca
gaaggtctgtactcaagcaggctggcagcaatgaagacttctttttcagctcagtttaag
tcacagttccaagcagcttcatccgcatctgctagcagcacatggggtggtaaaaaaggg
atggttattccacccaagatagacaccactgtccaaaagataaatacacctgcagccatg
cctcctcccagcttcataccaccttccaagataagtggatttatcagcagtgtcagaaat
gaaactacaaaaacagaaagtgatcgatacgagaaacgtgatcgtaggagaagtcgtgat
gacgatcgatatgatgatcgacatgacgaccgacacgaaagacggcgaaactatgatgat
gatcgacatgattacagacgagatgatgagaggagagaggatcgaaataggcacaatagg
ggacgagatcgtagtgatagagatagaagagacactcacgatagagggagtactggaagt
cgatcacacagccatgatagtgaaaggaggcatgatgacaggagcagcagaagaaatagt
catgatagtggaagtagaaggcatagctcagaggatgagagcagcaagtccatcagttcg
acaccagaaatactatctcaaagtataacaaccaacattgcatctcctgaagtcagccag
gtggcgtacccagtccccagtatgactatgaaacaattagttgccaaagcatcaaggtgg
gatagtacaggagattctggaattaaaacaagttctggggacaataacagcaacagtatg
cttcctccaactgacatgccaccacctgttaagaaagtcagaaagagtcgctgggacact
tga
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