Anneissia japonica (feather star): 117112223
Help
Entry
117112223 CDS
T08613
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117112223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117112223
03036 Chromosome and associated proteins [BR:
ajc03036
]
117112223
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117112223
Chromosome and associated proteins [BR:
ajc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
117112223
Chromatin remodeling factors
BAF complex
117112223
PBAF complex
117112223
GBAF(ncBAF) complex
117112223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
QLQ
ResIII
DEAD
HDA2-3
ABHD18
Motif
Other DBs
NCBI-GeneID:
117112223
NCBI-ProteinID:
XP_033111192
EnsemblRapid:
LOC117112223
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MSEEMMPGQSPMQGPSPGPMPSPAGSMQGMAQLPSPMHNQMPASQDSMSSQGNMPGQGPM
GSAGSMSGQSAMSGQGPIQSQGGPIQNQGGVQGSMQSPMHGPNPMQNIGGGPMTSQMPGQ
MPGPGQGGPISGQGGPMPGSSGPMQGPGGPMHGPSGPMQGPGGPMQGPGGPLQGPGGPMQ
GPGGPMQGPGGPMQGPGGPMQGPVGPMQGPGGPMQGPGGSMQGHGGPMQGPGVPMQGSNG
GPMQGPMGPMQGPGGPMQGPGGPMQGPGGPMQGPGGPMQGPVGPMQGPGGPMQGPGGSMQ
GPGGPMQGPVGPMQGPGGTMQGPGGPMQGPSGPMQGPSGPMPGQGGPMQGPMGAMQGPMT
SPGSGMPPGRQMGMPGMMPPPSGQHQGPPYGQGPIQFNQGNYSKLQRALESMKEHGMQDD
RRYSQLMALANRSKPQHQGYGGPADGMGDSPMSGHQQQPPPSRQSFLPQQLQQLKAQILA
YKYLARNQPMPDSLRSAVQGKHPMQSLQRPSPGMVGPPQPPQPPPVSSSQSSARTPTPPA
SQVPHWMPKGPPPPRQQSSPAPKAGPPTTQPSPAPKTPQAGQKPEPKPQNLTTVMLMQPK
QNRLVPVAKPQGIDPLTILHERENRISSRIAYRLQQLQNLPGSLPDDLKLKATIEMKALR
LLNFQRQLRQEVSSCMRRDTTLETALNSKVYKRTKRQTLREARLTEKLEKQQKMELERKK
RQKHQEYLSSILQHAKDFREFHRGVQSKISKITKAISTYHANTEREQKKETERMEKERMR
RLMAEDEEGYRKLIDEKKDKRLHFLLSQTDQYIANLTDLVRQHQETMKKKKKSKKKKRRR
PDPSMDGLDDENSQSSDLIVKVIETATGKLISGPDAPRASQLDAWLEMHPGYEVAPRDDD
STYDSSEEEEDEEDAEEEEEDTEKEQEPNEVEEYHGEEHENSLEDDEYKGRNYYTSAHTV
TEKVVSQPEMMVNGTLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTIALVCHLIE
KKRVSGPFLIIVPLSTLSNWSMEFDKWAPTCVKVVYKGSPTVRRLLGQQLRTTKFNALLT
TYEYVMKDRSVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYIAPHRILLTGTPLQNKL
PELWALLNFLLPSIFKSCSTFDQWFNAPFAMTGEKVELNEEETILIIRRLHKVLRPFLLR
RLKKEVENQLPEKVEYIIKCDMSALQRLLYRHMQAKGVLLTDGSEKGKHGKGGTKLLMNT
IMQLRKICNHPFMFQQIEESYCEHIGLSGSMIQGPDLYRVAGKFELLDRILPKLKRTKHR
VLLFCQMTNLMTILEDYFAYRGFRYLRLDGSTKADDRGELLKVFNMSDSPYFVFLLSTRA
GGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLMTVQSVEEKILAAA
QYKMNMDKKVIQAGMFDQKSTNSERKAYLARIIEQNADNAEEENEIPDDETVNQMIARTE
EDFEIYQRMDIERRREEAMAPGRKPRLMEEEELPSWLMKDEKEVERLTSEEETEKLFGRG
SRQRKDIDYSDGLTEKEWIRAIEDGNLDVVGESKRSTKKASRKRKLDDDDNNGSRDGSPI
GSKKDKDKPKKKRGRPPVEKLSPNPPKLVKQMKKLVASLARYKDGTGRPLSHPFLTLPPR
KELPDYYEAIKRPMDFRKIRDRIKNHRYRNLDDLEKDVMLMFENAQIYNVEASQIYEDSF
VLQSVFKSARQCLEETGKLPGEVSDTEAEDDDDEEDGSQGGSDSESKMFEHSNR
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggaaatgatgccagggcaaagccctatgcaagggccaagccccggtccgatg
cctagccctgcaggttccatgcaaggaatggcacagctaccttcaccgatgcataaccag
atgcctgcctcacaagattcaatgagctcgcagggaaatatgccgggacaaggcccgatg
ggaagtgcagggtccatgtcaggacagagtgccatgtctggtcaggggccaattcagagt
caaggtgggccaattcaaaaccaagggggagttcaaggctcaatgcaaagtccaatgcat
ggtccaaacccaatgcaaaatattggaggtggcccaatgacaagccaaatgcctggacag
atgcctggaccagggcaagggggaccaatttcaggacaaggtggacccatgcctggttct
agtgggccaatgcaggggccaggaggaccaatgcatggacctagtggtccaatgcaagga
ccaggtggtccaatgcaaggacctggtggtccattgcaaggacctggtggcccaatgcaa
ggacctggtggtccaatgcaaggacctggtggtccaatgcaaggacctggtggcccaatg
caaggacctgttggtccaatgcaaggacctggtggcccaatgcaaggacctggtggttca
atgcaaggacatggtggtcctatgcaaggacctggtgtaccaatgcagggctctaatggt
ggccccatgcaaggtcctatgggtcctatgcagggccctggtgggccgatgcaggggcca
ggtgggccgatgcagggtccaggtgggccgatgcagggtccaggtgggccgatgcagggt
ccagttgggccgatgcagggtccaggtggcccaatgcagggtcctggtggatcgatgcaa
ggtcccggtgggccgatgcaaggtcccgttgggccaatgcaaggtcccggtggaacgatg
caagggcctggtggcccaatgcagggtccaagtggtcctatgcagggaccaagtggtcct
atgccaggtcaaggtgggccgatgcaaggacctatgggggccatgcaaggaccaatgacg
agcccaggtagtggaatgccaccaggaagacaaatgggcatgccaggtatgatgccaccc
cctagtggtcaacatcaaggaccaccatatggacaaggacctattcaattcaaccaagga
aactacagtaaattacaaagggctctagagtcaatgaaggaacatgggatgcaggatgat
cgacgttacagtcagttaatggctctggccaataggagtaagccacaacatcaaggatat
ggtggaccagcagatggtatgggggatagtccaatgtccggtcatcagcagcaaccccca
ccgtcaagacaatcattccttcctcagcagctacaacagctcaaagcacagatactggct
tacaaatacttagcccggaatcagccgatgcccgattcgttgagatcagcagtgcagggg
aaacacccgatgcaaagccttcaaagaccgtccccagggatggtaggaccccctcaaccg
ccacagccaccaccagtgagttcaagccagagcagtgcgaggacgcctactccaccagca
tcacaggttcctcactggatgccaaagggtccaccaccgccaagacagcagtcttcccca
gcaccgaaggccggcccacctacaactcaacccagcccagcaccaaaaactccacaagct
ggacagaaacccgagccgaagcctcagaatttgaccacggtgatgctgatgcagccgaaa
cagaatcgactagtgccggtggcgaaacctcagggaatagatccgcttactatactacat
gaacgggaaaacagaatctcttctcgtattgcttatcgtctccaacaactccagaatttg
cctggctctttgccagatgacctcaaactcaaggctactattgaaatgaaagctctccga
ttactcaacttccaacgacagttacgccaagaggtgtcatcttgcatgaggcgggacaca
acattagagacggcattgaattctaaagtttataagcgaactaaacgccaaacactacgt
gaagccaggctgacggagaaacttgaaaaacaacagaaaatggaattggaacgcaaaaag
agacaaaagcatcaggaatatctgagtagtatattacagcatgctaaagatttccgtgaa
ttccatcgcggtgttcagagtaaaatcagtaagattaccaaagccatctccacgtaccat
gcgaacacagaacgtgaacagaagaaggaaacagagaggatggagaaagaaagaatgcgc
agacttatggctgaagatgaagagggctacagaaaacttattgatgagaagaaggacaaa
cgtctacatttcttgctcagtcagacggatcagtacatcgctaacctcactgatctggtt
cgacaacatcaggagacaatgaagaagaaaaagaaatccaagaaaaagaagaggaggagg
ccagacccctctatggatgggcttgatgatgaaaacagccagagcagtgatttgatcgtc
aaagttattgaaacagccaccggtaagctaatcagtggccctgacgctccacgggccagt
caacttgatgcctggcttgaaatgcatcccggatacgaggtcgctccccgtgatgatgat
tcgacctacgatagctcggaggaggaagaggatgaggaggatgccgaagaagaggaagag
gacacagaaaaagaacaagaacccaatgaggtggaagaataccatggcgaagagcatgag
aattcattggaagatgacgaatacaaagggcgtaattactacactagcgctcatacagtc
actgagaaggtagtttcacagccagaaatgatggtcaatggaacactgaaggaataccag
atcaagggcttggagtggatggtatctctgtacaacaacaacctaaatggtatattggcc
gatgagatgggcttaggaaagaccatccagacaattgctttggtttgccatcttattgag
aagaagcgagtcagtggaccattcttgatcatcgtaccactgtctaccttgtcaaattgg
agtatggagtttgataagtgggccccaacctgtgtcaaggtcgtgtacaagggttcgcca
accgtgcgccgtcttctcggacagcagctacgaacaaccaaattcaacgcccttttaact
acgtacgaatatgtaatgaaggaccgttcagtcctagctaagattcgttggaagtatatg
attgttgatgaaggccacaggatgaagaatcatcattgtaaactaactcaggtgctaaat
actcattatattgctcctcatcgtatattgctcactggaacacccctacagaataaactg
ccagaattgtgggctctcttgaacttcctactgccaagcatcttcaagtcttgcagtaca
tttgatcagtggttcaatgcaccgtttgctatgactggtgaaaaggttgaactgaatgaa
gaagagaccattctgattatccgccgtcttcacaaggtgcttcgtccgttcttgctacgt
cgtttgaagaaagaggtggagaaccaattgccagagaaggttgagtacattatcaagtgt
gatatgtctgcattgcaacgtcttctgtaccgccacatgcaggctaagggtgtgctacta
actgacggatcagagaaaggaaaacatggtaaaggtggcaccaaacttctaatgaacacg
attatgcagctgcgaaagatctgcaaccatccatttatgttccagcaaatagaggaatcg
tactgtgaacacattggcctgtctggtagcatgatccagggccccgatttgtatcgcgtt
gccggtaagtttgagctcctcgatagaatcctgccgaaactgaaacgaaccaagcataga
gtgttgctgttttgtcagatgacgaatcttatgaccatactggaggattactttgcatac
agaggtttcagatacttgcgtctggatggctcgaccaaggctgatgatcgtggggaattg
ttgaaggtgtttaacatgtcggacagcccgtactttgtcttcctcttgagtaccagagcc
ggaggcctaggcctgaatcttcaggctgctgatactgtcatcatatttgacagtgattgg
aatccacatcaggatttgcaagctcaagatcgtgctcatcgtatcgggcaacagaatgaa
gtacgtgttttgagactgatgaccgtgcagagtgtggaggagaagatcttggcagccgca
cagtacaagatgaacatggacaagaaggttattcaggcaggaatgtttgaccagaaatca
accaactccgaacgtaaggcttatcttgcacgaatcatcgaacaaaatgccgataatgct
gaggaggagaacgagattcctgacgatgaaactgtcaaccagatgatagcgcgtaccgag
gaggactttgagatttatcagcggatggacattgagagacggcgggaagaggcaatggct
ccaggacggaagcctcgtctcatggaggaggaagaactgccttcgtggctgatgaaagat
gagaaggaagtagagaggttgacaagtgaggaggaaacagagaaactctttggaaggggc
tcaaggcagcgtaaggatatcgattactcggacggcctcaccgagaaggagtggattaga
gccattgaagacggcaatctcgatgtagtaggagaatcgaagcgttccactaagaaagca
tctaggaaacgtaaacttgacgatgatgacaacaatggctccagggacggaagtcccatt
ggatccaaaaaggacaaagacaagcccaagaagaaacgaggtcgtcctccagtcgaaaaa
ctttctccaaacccaccgaaactagtgaagcaaatgaagaaactagttgcatccttggcg
agatacaaagatggtactgggagaccactttctcatccattcctcaccctacccccaaga
aaggagcttcccgattactacgaggctatcaaacggcctatggacttccgcaagattcga
gaccgcattaaaaaccatcgatacagaaacctggatgatcttgagaaggacgtgatgttg
atgtttgagaacgcacagatttacaacgtggaagcatcacagatatatgaggattccttc
gtccttcaatctgtattcaagagtgcgcgccagtgcttggaggaaaccggtaagctcccc
ggagaggtgagcgatacagaggcggaagatgatgacgacgaggaagacggctctcaagga
ggatcggactcggaaagtaagatgtttgaacattcaaatagatga
DBGET
integrated database retrieval system
