Anneissia japonica (feather star): 117114132
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Entry
117114132 CDS
T08613
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase-like
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117114132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117114132
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117114132
Spliceosome [BR:
ajc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117114132
Complex C
U5 SnRNP specific factors
117114132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_19
AAA_22
PhoH
SWI2_SNF2
DrmE_N
Motif
Other DBs
NCBI-GeneID:
117114132
NCBI-ProteinID:
XP_033113574
LinkDB
All DBs
Position
Unknown
AA seq
2143 aa
AA seq
DB search
MADATARSLQFEYKANSNLVLQADLRLLEKRRRDEPTGEVMSLSGKLLGTTMGDKAKRAK
PPLPEERRAKKKKEDSKYDIEKFKGQTLLSEGIEDLGGIFYKPKTPATKVTYEALLSFIQ
AAIGDQPRDILCGAADEVLATLKSEVTRGKDKKRELEGLLGSLAEERFALLVNLGKKITD
FTTEKNQKPIDEDIDDTLGINVQFQESDDEEGDSIFVEVKEGSESEEEDVEDTHVDVTLK
TSLGGGDDLLSKTEKGLHPRDIGAYWLQKELSKFYDDPNVSQQRSNEVLSILQSGVSDGQ
CENQLVMLLGHEQFHFIKILRQHRLMILYCTLLAKAQNDLERTKIEEKMKVTPELAIILE
RLTETDQEDLVREERARKMAARKSKVDADIEEAMETDQESTMVPKQVLEIDDLVFTQGGH
MMANKRCHLPDGSFRKERKGYEEVHVPALKPKPFEENESLVAIERLPKYAQPAFEGFKSL
NRIQSRLYKTAMESDENILLCAPTGAGKTNVALLTILREIGRNINMDGTINVDAFKIIYI
APMRSLVQEMVGNFNKRLSTYGITVSELTGDHQLSKDQIHGTQIIVCTPEKWDIITRKGG
EKTYTQLVRLIIIDEIHLLHDDRGPVLESVIARTIRNIETSQEEVRLVGLSATLPNYQDV
ATFLRVKPDKGLFFFDNSFRPVPLEQQYVGITEKKALKRFQLMNEIVYEKVMDHAGKNQV
LVFVHSRKETGKTARAIRDMCLEHDTLGQFLREGSASTEVLRAESDHAENLELKDLLPYG
FAIHHAGMNRLDRSLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPDKGRW
VELGPLDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPVESQFISKLADNL
NAEVVLGTIQTMRDAVNWLGYTYLYIRMMRSPALYGVDGDDQERDEYLEQRRIDLIHTAA
SILDKNNLIKYDKKSGNFQVTELGRIASHYYCTHESMSTYNSLLKQTLSEIELFRVFSLS
SEFRNITVREEEKLELNKLLERVPIPVKESIEEPSAKVNVLLQAYISQLKLDGFALVADM
VYVTQSAGRLVRAIYEIVLHRGWAQLADKTLALAKMVDKRMWQSMIPLRQFKKIPDEVVK
KIEKKNFPWERFYDLGPNEIGELIRMPKMSKTIHKFVHQFPKLDLSSHIQPITRSTLRVE
LTITPDFQWDDKVHGNSEAFWIFVEDVDSEIILHHEYFLLKSKFAKDEHIIKFFVPVFEP
LPPQYFIRVVSDRWIGSETQLPVSFRHLILPEKNPPPTELLDLQALPVSALRNASFETLY
SSKFSVFNPIQTQVFNAVYNGDENVFVGAPTGSGKTIIGECAILRMLMQNPDSRCVYVTP
MDELAEQVHQEWHAKFQMLLGKKVVLLTGETSTDLKLLAKGNIIISTPEKWDVLSRRWKQ
RKNVQNVNLFIVDELQLTGGDNGPVLEVICSRMRYISSQIERNIRIVALSSSLANAKDVA
QWLGCNANNTFNFHPNVRPTPLELHIQGFNITHTASRLIAMVKPTYNAIIKHSLNKPIIV
FVPSRKQTRLTAVDLLTYASADDAEESRFLHVPKEDLSGHLSKVTDETLKEMLENGIAYI
HEGLTEMEKKVVEQLFTAGAIQLVVAARNMAWGMTMSAHLVVVMDTQYYNGKIHAYVDYP
ITDVLQMVGRANRPDVENEIGKCVILCQGSKKDFYKKFLYEPLPVESHLDHCLHDHFNAE
VVTKTIENKQDAVDYLTWTFIYRRMTQNPNYYNLQGVTHRHLSDHMSELVENMLHNLEQS
KCISIEEEMDISPLNLGMIAAYYYINYTTIELFSMSLNNKTKIRGLIEIISEAAEYDRIP
IRHHEDSVLRQLAQKVINKIPNAKYNNPHIKTNLLLQAHLSRMQLSAELQSDTEDILGKA
LRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWNKDSYLKQLPHFNADLVKRCTEHNI
ESIFDIMEMENDERNELLRLSDAQMADVARFCNRYPNIELTYDVQDKNNLESGSPVVVMV
TLEREDEITGPVIAPFFPQKREEGWWVVIGDTKSNSLISIKRLTLQQKAKVKLDFVAPST
GSHTYTIYFMSDAYMGCDQEYKFTVDVREPVSGSDSDDSSEED
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctactgcccgttccttgcagtttgagtacaaagcgaactctaatcttgta
cttcaagctgacttgagacttcttgagaaacggcgcagagatgagccgacaggtgaagtt
atgtccctcagtgggaaacttttaggtacaactatgggtgacaaggctaaacgtgctaag
cctcctttgcctgaagaaagacgcgcgaaaaaaaagaaagaggactcaaaatatgacata
gagaaatttaaaggacaaaccttattgtctgaaggcattgaggacttgggtggcatcttc
tataaaccgaaaacaccggcaactaaagttacttatgaggccttgcttagcttcattcag
gctgctattggagaccagcctcgcgacatattgtgtggagctgcagatgaggtactagct
accctgaagtcggaagtaacccgtgggaaagacaaaaagagggaactggagggactctta
ggaagcttggcagaagaaaggtttgcactgcttgtcaacttgggcaagaaaatcacagat
ttcaccacagaaaaaaaccaaaaaccaatagatgaagatattgatgatacccttggcata
aatgtccagtttcaagaatcagatgatgaggaaggagattctatttttgttgaagtgaag
gaaggctccgagagtgaagaggaggatgttgaggacactcacgttgatgtcaccctcaaa
acaagtttaggtggtggagatgacctattgtccaagactgaaaagggactgcacccaagg
gatatcggtgcctattggctgcagaaagaactgagcaaattttacgacgaccccaatgtg
tcgcagcaacgatctaatgaagtcctctcaattttacagtctggtgtaagtgatggccag
tgtgagaaccagttggtaatgttgcttgggcatgagcaatttcactttatcaaaattttg
cggcaacatcgtctgatgattctttattgcacacttttggccaaagctcagaatgatttg
gaacggacaaaaattgaggagaaaatgaaagtgacccctgaacttgccataattctggag
cgattgacagaaacagaccaggaagatttagtgagggaagaaagagcaaggaaaatggct
gccagaaaatcaaaggtggatgctgacatagaagaagccatggaaactgatcaggaatcg
acaatggttcctaaacaggtattagaaattgatgatctggtatttacccaaggaggacac
atgatggctaacaagcgctgccacttgcccgacgggtccttcaggaaagaacgcaagggc
tacgaggaggtccacgtaccagcactcaaaccaaagccatttgaagaaaatgagtctttg
gttgccattgaacgtctaccaaaatatgcccagcccgcgtttgagggttttaagagtttg
aaccgaatccagagtcgactctacaaaacggccatggagagtgacgagaatattctgttg
tgcgccccaacgggagctggtaaaacaaatgtggccctactgaccattcttcgagagatt
ggcagaaacattaacatggatggtaccattaacgtagatgccttcaagattatctacatt
gcaccaatgagatcgcttgtacaggagatggttggcaacttcaataagaggctcagtacg
tatggcattaccgtgtccgagttgacaggcgaccaccaactgagcaaggatcagattcac
ggcacacaaatcattgtttgcacaccagagaagtgggacattattactcggaaaggagga
gagaagacttacactcaactagtccgccttatcattattgatgagatccacctgttgcat
gatgaccgaggacctgtattggaatctgttattgcaagaaccatccgtaacattgagacg
tcacaagaggaggtgcgattggttggactcagcgccacgctaccaaactatcaagatgtg
gcgacattcttgcgtgtcaaacccgacaaggggttgttcttctttgacaacagtttccga
ccggtgcctcttgagcagcagtatgttggtatcacagaaaagaaagctctgaagcgtttc
cagctaatgaatgaaattgtttacgaaaaagtgatggatcatgctggcaaaaatcaggtt
cttgtgtttgtacactcgcgtaaagagaccggtaagacagccagagccatacgtgacatg
tgcttagagcatgacacgctaggtcagttccttcgtgaaggttcagcctccactgaggtg
ttgagagctgagagtgaccacgcagagaatcttgaattaaaggatctccttccttatgga
tttgccatccatcatgccgggatgaacaggcttgataggtccttggttgaagatctgttt
gctgacaggcacattcaggttctggtgtcgacagcgacgcttgcctggggtgtcaacctt
ccagctcatactgtcattattaaaggaacacaagtgtacagtcctgataaaggtcgctgg
gttgagcttggcccgttggatatccttcagatgttgggtcgtgcaggtcggccgcagtac
gacaccaaaggagaaggaattttgatcaccagccatggggagttacaatactacctctcg
ctacttaatcaacagctgccagtagagagccagtttatctctaaattagcagacaaccta
aacgcagaggtggtgcttggcacaattcagacgatgcgtgacgctgttaattggcttggc
tacacctatctgtacatccgtatgatgcggtcaccagcgctgtatggggtagatggcgat
gaccaggagcgagatgagtacttggaacagcgacgtattgatctcatccatacggctgct
tctatcctcgacaagaacaaccttattaaatacgacaaaaagtctggcaattttcaggtt
actgagcttggtcgtattgctagccattactattgtacccatgaaagtatgtccacgtac
aacagcctgctgaagcaaacgctgagtgagatagaactctttcgagtgttctccctctca
tcggagttccgtaacatcactgtcagagaggaagagaaacttgagttgaacaaacttcta
gagagagtgccaatacctgtcaaagaaagcattgaggaacctagtgctaaggtgaatgta
cttcttcaggcatatatttcccagctgaagttagatggctttgcacttgtggctgacatg
gtatatgttacacagtcggcaggccggttggtacgagctatatatgagattgtgctacat
agaggctgggcccagctggctgacaagacactagctcttgccaagatggttgacaaaaga
atgtggcagtcaatgattcctctccgtcaatttaaaaagattccggatgaagttgtgaaa
aagattgagaagaagaacttcccgtgggaaagattctatgatctcggaccaaacgaaatt
ggggagctgatacgcatgccaaagatgagcaaaacgatccacaagtttgttcaccagttt
ccaaagcttgacttgtcctcacacattcagccaattacgcgttccactctgcgtgtcgag
ttgaccatcacgccagatttccagtgggatgacaaagtgcacggcaactcggaagcattc
tggatatttgtggaagatgttgatagtgaaatcattcttcatcacgaatacttcctactg
aaaagtaaattcgcaaaagatgagcacattatcaagttctttgtaccagtctttgagccg
ttacccccgcagtacttcattcgagttgtatctgatagatggataggctccgagacccag
cttccggtgtcattccgtcacctgatcctaccggagaagaaccctcctcccacagagttg
ttggatctgcaagccttgccggtctcggctttgaggaatgcttcatttgagaccttgtac
tctagcaagtttagtgtcttcaatccaattcaaacccaagtgtttaatgctgtgtacaat
ggtgatgaaaatgtgtttgttggtgctccaaccggtagcggaaagaccatcattggagag
tgcgccatcttgaggatgttgatgcagaaccctgacagcaggtgtgtgtatgttacaccc
atggatgagctggcagaacaggtccaccaggaatggcatgcaaagttccagatgttgttg
ggaaagaaagtggttctgctgacaggggagaccagcactgatttaaagcttcttgccaag
ggcaacataatcatcagcaccccagagaaatgggacgtgttgtccagacgatggaaacag
aggaaaaatgttcagaatgtgaacttgtttattgttgacgaactacagttaactggtggc
gataatgggcctgttcttgaagttatttgctccagaatgcgttatatctcatctcaaata
gagcgtaacatccgaattgttgccctcagttcatcgcttgccaatgctaaagacgttgct
cagtggctcggctgcaatgccaacaatactttcaactttcaccccaatgtgcgacccaca
cctttggaactacacatacagggattcaacatcactcacacagcatctcggctcatcgcg
atggtgaaaccgacatacaatgctatcatcaagcattcgctgaataaaccgataatcgtg
tttgtgccatcccgcaaacaaacgcgtcttactgcagtggacctgctcacctacgcttct
gctgatgatgctgaagagagtcgattcctgcatgttccaaaagaagatctcagtggccac
ctcagtaaagtaactgatgaaacgttaaaagaaatgttagaaaatggtattgcctacatc
cacgagggcttaactgagatggagaagaaggttgttgaacagctgttcacagccggtgcc
attcagctcgttgttgctgcaaggaacatggcctggggaatgactatgtctgctcatcta
gtcgttgtaatggacacacaatactacaatggaaaaattcatgcttatgtggattatcca
ataaccgatgttctacaaatggtaggccgggctaacagaccagatgtggaaaacgaaatt
ggaaaatgtgtgatcttatgtcagggatcaaagaaggacttctacaagaagtttttgtac
gaacctttaccagtagaatctcatctcgaccactgtcttcatgaccacttcaatgcagag
gttgttaccaagacgattgagaacaagcaggatgctgtggactatttgacctggaccttt
atctacaggcggatgacacagaaccccaattactacaatctccaaggtgtaacccatcgt
catctctctgaccacatgtctgagttggtagagaacatgttacataacctagagcagtcc
aagtgtatcagcattgaggaggaaatggatataagcccattgaaccttggcatgatcgca
gcctactactacatcaactacacaactattgaattgtttagtatgtcacttaacaataag
actaagatcagaggactgatagagatcatctcagaagctgctgagtacgacaggataccc
atccggcatcatgaagactcggtgcttcgtcagttagcgcagaaggtcattaacaagata
cccaatgccaagtacaataacccgcatatcaagaccaacctgctgctacaggcccatttg
tctagaatgcagctgtcagccgagctacagtcagacacagaggatatactaggaaaagcc
cttcgtttgatccaagcttgtgtggatgtactgagtagcaacggctggctatcgccagcc
ctggccgccatggagcttgcgcagatggtaactcaagcaatgtggaacaaagattcctat
ctgaagcaactgccacacttcaatgctgacttggtgaagcgctgcactgaacataatatt
gaaagcatctttgacattatggagatggagaatgatgagcgtaatgagctgcttcgcttg
tctgacgcccagatggccgatgtggccagattctgtaaccgttaccccaacatagaactg
acgtatgatgtccaagataaaaacaacttagagagtggttcaccagttgttgtcatggtt
acacttgagcgagaggatgagatcacaggccctgtgattgctccattcttcccccagaaa
cgtgaagaaggctggtgggttgtgatcggagacaccaaatcaaacagtcttatctccatc
aaacgattgaccttacaacagaaggccaaggtcaagctggacttcgtggcgccctctact
ggatcacacacatacactatctatttcatgagtgacgcttacatgggatgcgatcaagag
tataaattcacagtggatgtcagggaaccagttagtggcagtgatagcgatgacagctct
gaagaggattaa
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integrated database retrieval system
