KEGG   Anneissia japonica (feather star): 117114747
Entry
117114747         CDS       T08613                                 
Name
(RefSeq) replication factor C subunit 2-like
  KO
K10755  replication factor C subunit 2/4
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03030  DNA replication
ajc03410  Base excision repair
ajc03420  Nucleotide excision repair
ajc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117114747
   03410 Base excision repair
    117114747
   03420 Nucleotide excision repair
    117114747
   03430 Mismatch repair
    117114747
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ajc03032]
    117114747
   03036 Chromosome and associated proteins [BR:ajc03036]
    117114747
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117114747
DNA replication proteins [BR:ajc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117114747
  DNA Replication Termination Factors
   ELG1-RFC complex
    117114747
Chromosome and associated proteins [BR:ajc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117114747
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117114747
  Check point factors
   HRAD17(Rad24)-RFC complex
    117114747
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 AAA_14 AAA_22 Viral_helicase1 AAA_11 RCF1-5-like_lid AAA_24 nSTAND3 RNA_helicase AAA_5 DEAD AAA_30 AAA_16 AAA_19 ABC_tran MipZ AAA_18 SLFN-g3_helicase AAA_3 NTPase_1 Rad17 AAA_28
Other DBs
NCBI-GeneID: 117114747
NCBI-ProteinID: XP_033114329
LinkDB
Position
Unknown
AA seq 179 aa
FIKGPPGTGKTTSILCLARKLLGSAYKEGVLELNASNDRGIDVVRNKIKMFAQKKVTLPV
GRQKIVILDEADSMTDGAQQALRRTMEIYSKTTRFALACNTSDKIIEPIQSRCAVLRYSK
LTDAQVLSRLLEVCEAENVTYTDEGLEAIIFTSQGDMRQVGKSCLFALLIIIMMSFTFI
NT seq 540 nt   +upstreamnt  +downstreamnt
tttatcaagggtccaccaggaactggaaaaactacaagcatcctgtgtttagccaggaag
ttgttaggttctgcttacaaggaaggtgttctggagttaaatgcgtccaatgataggggt
attgacgttgtaagaaacaagattaaaatgttcgcacagaagaaagtgactttaccagtt
ggaagacagaaaattgtaattctggatgaagcagatagcatgaccgatggcgcacagcag
gctcttaggcgtaccatggagatctattccaagacaactcgtttcgctctagcttgcaat
acttctgacaagatcattgagccgatacagtcaagatgtgccgtacttcgctactcaaag
ttgacagatgcacaggtcctcagtaggctgttagaggtgtgcgaggcggagaatgttaca
tatacagacgaggggctggaggcgatcatcttcacatcacagggtgacatgcggcaggtt
gggaagagttgtctctttgccttgttaataataataatgatgtcattcacatttatataa

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