Anneissia japonica (feather star): 117114804
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Entry
117114804 CDS
T08613
Name
(RefSeq) 5'-3' exoribonuclease 2-like
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03008
Ribosome biogenesis in eukaryotes
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117114804
09123 Folding, sorting and degradation
03018 RNA degradation
117114804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117114804
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117114804
03009 Ribosome biogenesis [BR:
ajc03009
]
117114804
03016 Transfer RNA biogenesis [BR:
ajc03016
]
117114804
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117114804
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
117114804
Ribosome biogenesis [BR:
ajc03009
]
Eukaryotic type
Pre-60S particles
RNases
117114804
Transfer RNA biogenesis [BR:
ajc03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
117114804
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
117114804
NCBI-ProteinID:
XP_033114384
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MGVPAFFRWLSKKYPSIIVHCVEEKGKEVNDVKIPVDLSQPNPNNVEFDNLYLDMNGIIH
PCCHPENKPAPKNEDEMMVLIFEYIDRLMSIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKESREKRESIKKIRREIIERGGEVPPEKAATEHFDSNCITPGTEFMAYLAECLRYYVT
DRLNNHPGWKDLKVILSDANAPGEGEHKIMDYIRRQRPNPDHDPNTHHCLCGADADLIML
GLATHEPNFTIIREEFKPNQPRACDICGQTGHEMDECEGLPKTKSGEHDELSKPIGQETE
FIFLRLNILREYLEKELWMTGLPFPFDIERAIDDWVFMCFFVGNDFLPHLPSLSIREGAI
DRLIRLYKKAVYKTNGYLTENGIVNLSRVQMILQDLGEAEDEIFKKRRESDLRFRKINQN
KKRRELADAPQFVPSGFLAPTPIGQRGEAHSAKDIRNAVQDATLNLNLVHFREEWDRKNC
IKWEGAIDRLIRLYKKAVYKTNADAPQFVPSGFLAPTPIGQRGEAHSAKDIRDAVQDGRN
QANKNAADALRSQLNGGNDEKKAEPPRRGTKRTVEDMIKEDAEQDQNDAVKLWEDGWRER
YYQGKFDVQPDDHEFRHKVGAAYALGLCWVLQYYYQGCASWDWYFPYHYAPFASDFVDID
KTVSTKFPKGTKPFKPLEQLMSVFPAASGNFLPTTWRSLMSGIDSPIIDFYPDDFKIDLN
GKKYAWQGVALLPFVDEGRLLETLGEVYPNLAEEEKMRNSLGPDRLFVGKDHPLYSFIEG
IYEGGKPLEDNVTVSTELSQGMAGEIWCDKYAVQSDGTKQSPLPMLPDIKGCKVMSCAYK
DPDYGKDYLFKCNMLPGAKLPDKVLKPEDFEKTKSGNQQWRPRIGFSSNFPRASLGNAGH
RMVNHYSSIPPPKSLMGQAPRYDGQRSRSGGQSYPDYGQGGGRNNRGQGSSGRYGNQGGG
GGGYYGGQGGGGGGNYYGDRKGGYGGQSHYGGGSGGGGGGYQQSYSGGGQHGWNRNMQAQ
QSAYYQNQQRYQQQQHQPYQQQQYNQGRRKQRDDRYRSGANRSHPYPPPLQQHRRY
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccagcctttttcagatggctgagcaaaaaatatccatcaattattgtgcac
tgtgttgaagaaaagggaaaagaagtgaacgatgtgaagattccagtggatttgtcgcag
cctaacccaaataacgtggaatttgataatttgtatctggatatgaacggcatcattcat
ccgtgttgtcacccggaaaataaaccagcacctaagaatgaggatgaaatgatggtcctc
atctttgaatacattgaccgcctcatgagtattgtccggccgaggaagcttctgtacatg
gccatcgatggcgtagcgccgcgggccaagatgaaccagcaaagatctcggagattcaga
gcatctaaggagagcagagaaaagcgtgagagcataaagaaaatcagacgtgagataata
gaacggggaggggaagttcccccggagaaggcagcaacagagcatttcgatagtaactgc
attacacccggcacggagttcatggcatatttggctgagtgcctccgatactatgtcaca
gatagactgaacaatcatccaggctggaaagatcttaaggttattttgtcagatgccaat
gcccctggagagggagagcacaaaatcatggattatatacgaaggcaaagacctaatcca
gaccatgatcccaatactcatcattgtttatgtggggcagatgctgatctgattatgctg
ggtttggcaactcacgagccaaattttacaatcatcagggaggaattcaaaccgaaccag
ccaagagcatgtgatatatgcggacagactggacatgaaatggatgaatgtgaaggcttg
ccaaaaaccaaaagtggagagcatgatgaactatcaaagcctattggtcaagaaacagag
tttattttccttcgcttgaacattctgagagagtaccttgaaaaggagctttggatgact
ggtcttccgtttccttttgatattgagagagcgattgatgattgggttttcatgtgtttc
tttgtcggtaacgacttcttgccgcatcttccttcattatcaattagggaaggtgctatt
gatagacttatcagactgtataagaaagctgtgtacaaaacaaatgggtatctgacagag
aatggaattgtaaatttaagccgtgtgcaaatgatattacaggatcttggtgaagctgaa
gatgaaatttttaagaaaagaagagagagtgatctgcgatttcggaaaatcaatcaaaac
aaaaagcgaagagagttggctgatgcaccgcagtttgtaccatctggatttttagcccca
acacctattgggcaaagaggtgaagcacacagtgcaaaggacataaggaatgcagtacaa
gatgcaactttaaatttgaatttagttcattttagagaagagtgggatcggaagaattgc
ataaaatgggaaggtgctattgatcgactaatcagactgtataagaaagctgtgtacaaa
acaaatgctgatgcaccgcagtttgtaccatctggatttttagccccaacacctattggg
caaagaggtgaagcacacagtgcaaaggacataagggatgcagtacaagatggcagaaac
caagctaacaagaatgctgcagatgccctgcgatcacagctgaatggaggtaatgatgag
aaaaaggcagaaccacctagaagaggcaccaaaaggacggtggaggacatgataaaagaa
gatgctgaacaagatcagaatgatgctgttaagttatgggaagatggttggagagagcgt
tactaccagggaaagtttgatgtacaaccagatgatcatgagttccgacacaaagtgggt
gcagcatatgcattaggtctttgctgggtcttacagtactactaccaaggatgtgcatcg
tgggattggtacttcccctatcactatgctccgttcgcctcggacttcgtcgacatcgat
aaaaccgtcagtacgaagtttcccaaaggaacgaagccatttaagcccctggagcagctg
atgagtgtgttcccagctgctagtggcaacttcctcccaactacatggaggtccttgatg
agtggtattgactcgcctatcattgacttttatcctgatgacttcaaaattgatctgaat
ggtaaaaagtatgcatggcaaggtgttgcattgctaccatttgtcgatgagggtcgattg
ttggaaactctgggagaggtttatccaaatctcgcagaagaagaaaagatgaggaacagc
ctaggaccagatagactatttgttggtaaagatcatccgctgtattcatttattgaaggc
atctatgaaggaggaaaacctctcgaagataatgtcaccgtaagcacagagcttagccaa
gggatggcaggggaaatctggtgtgataagtatgctgtccaatctgatggcaccaagcaa
tcaccacttcctatgttacctgacattaaaggatgcaaagtcatgagctgtgcatacaaa
gatccagattatggaaaggattacctgtttaaatgtaatatgcttccaggagccaaacta
ccagacaaggttcttaagcctgaggattttgaaaagacaaagagtggtaatcaacaatgg
cggcctaggattggattttcgtccaattttccgcgtgctagtctaggcaacgctgggcat
aggatggtgaatcattactcatccattcctcctcccaagtcattgatgggtcaagcacca
agatatgatggtcagaggtcaaggagtggaggtcaatcctatccagattatggtcaaggt
ggtggtcgaaataaccgagggcaagggtcaagcggacgttacggaaatcaagggggaggt
ggcggcggctactacggtggacaaggaggaggtggcggcggtaattattatggtgacaga
aaaggaggttatggcggacagagccactatggtggtggtagtggtggaggaggcggtggc
tatcagcaatcgtatagtggaggaggacaacatggctggaatagaaacatgcaggcacaa
cagagtgcctactaccagaatcaacaacgttaccagcaacagcaacatcaaccatatcaa
caacagcagtataaccaagggcgcagaaagcagagagatgatcgctacagatctggagca
aaccgaagccatccttacccacctccactgcaacaacatcggcgttattag
DBGET
integrated database retrieval system
