Anneissia japonica (feather star): 117115356
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Entry
117115356 CDS
T08613
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117115356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117115356
03009 Ribosome biogenesis [BR:
ajc03009
]
117115356
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117115356
Spliceosome [BR:
ajc03041
]
Complex A
U1 snRNP components
U1 related factors
117115356
Complex B
117115356
Ribosome biogenesis [BR:
ajc03009
]
Eukaryotic type
Pre-60S particles
Helicases
117115356
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
117115356
NCBI-ProteinID:
XP_033115001
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MSRFDRGDRFHDSGRSDRRGGGGGGYGGRGGFGGGPRFGGRGGGGGGGGGMRDKFNDPGS
RLRRPRWEMKDLIPFEKNFYREHPDVSRRSPLEVQRYRSAGEITVKGRDVPKPVQGFQEA
AFPDYVMDCIMKQGFKQPTAIQSQGWPIALSGQDMVGIAMTGSGKTLSYILPAIVHINNQ
PFLERGDGPICLVLAPTRELAQQVQQVSAQFGSSSRIKSTCVYGGAPKGPQIRDLERGVE
ICIATPGRLIDFLEAGKTNLRRCTYCVLDEADRMLDMGFEPQIRKIIEQIRPDRQMLMWS
ATWPKEVRQLAEEFLKDYSQVNIGSLSLSANHNILQIVDVCDESEKDMKLIKLLEEIMQE
KENKTLIFVETKRKTDELVRRMRRDGWPAMCLHGDKSQPERDWVLKEFRSGSSPILAATD
VASRGLDVKDVKFVINYDYPNNSEDYVHRIGRTARSNHTGTAYTFFTAANAKQANDLIGV
LAEAKQQVNPKLMELAQCARGFGKGRSRYRNTGGYGGGGGRFNSGRDTGRGGGFRNSMGG
DRMGSRMDNGPSRSGGMSGGPPRGGMSNGYSGGRDAGNRNGYGSRPPPGGHVSNGMGRQD
SRPPQSNGMSKGGPPPQKPVQRSGPPPQPPSRSGPPPSASRPPPAAAPPTGPTAQQHQQQ
QQQQQMMSQMAAQGTDPSQMASMDPAAVQQYYQYYYQYWQQYQQQAVAAAPAQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagatttgatagaggagacagatttcatgattctggacgctctgacagacgagga
ggtggcggtggaggatatggaggtcgcggtggctttggtggtggaccacgatttggtgga
agaggtggtggtggtggaggtggtggtggaatgcgggataaattcaatgatcctggttca
agactcaggagaccccgatgggaaatgaaagatttaattccttttgagaagaatttctac
agagagcacccagatgtatcacgcagatctcctcttgaagtacaacgataccgcagtgcg
ggcgagataactgtcaagggacgagacgtgcccaagccagtgcaagggttccaagaagcc
gcgtttcctgattatgtaatggattgcattatgaaacaggggttcaaacagccaacagca
attcagtctcaaggttggccaatagcactcagtggacaggatatggtaggcattgctatg
acaggctctggaaagacactttcatacattcttcctgctattgtgcatatcaacaaccaa
ccatttttagagagaggagatggtcctatatgtttggtattggcaccaactcgtgagcta
gcccagcaagtacagcaagtttcagcacaatttggctcctcctccaggatcaagagtacg
tgtgtctatggcggagccccgaaaggccctcagatacgtgatctagaaagaggagttgaa
atttgtatagccacacctggtcgtcttatcgacttcttggaagcaggcaaaaccaaccta
agaagatgcacatactgtgtactagatgaagctgataggatgttagacatgggctttgaa
cctcagattagaaaaatcattgaacagatcaggcctgaccgtcaaatgctgatgtggagt
gcaacatggccaaaagaggtacgccagcttgctgaagagttcttgaaggactattctcag
gtgaacattggctcactgagtctctcagctaatcacaatattttgcagatagtagatgta
tgtgatgaatctgagaaagacatgaagttaatcaagcttcttgaagaaattatgcaggaa
aaggagaacaaaacacttatatttgtagaaactaaacggaaaacagatgagcttgtcaga
agaatgagaagagatgggtggccagcgatgtgtctccatggagacaagtctcagccagaa
cgtgactgggttttgaaagaattccgctctggcagctcaccaattctggcagctactgac
gtggcatctcgtggattagatgtaaaagatgtcaagtttgtgataaactatgactaccca
aataattctgaggactatgttcaccgaattgggcgaacagcacgtagtaaccacacaggt
actgcctacacattcttcactgcggccaatgctaaacaagcaaacgatctcattggtgtc
ctggctgaggcgaagcagcaagtgaacccaaagctcatggagttggcacagtgtgctaga
ggttttggcaaaggccgcagtcgttataggaatactggtggttatggtggtggcggtgga
cgctttaatagtggacgagacacaggaagaggaggcgggtttaggaattcaatgggtggg
gatagaatgggatccagaatggacaatgggccttcaagaagtgggggcatgagtggtggc
ccaccaagaggtggtatgtcaaatggttattcaggtggcagggatgctggtaaccgaaat
ggttatggctctagaccccctccaggtggacatgtttccaatggtatgggaaggcaggac
tctcgtcctcctcaaagtaatggtatgagtaaaggtggccctccacctcaaaagcctgtt
cagaggagtggaccaccacctcaacccccaagcagaagtggtcctccaccatcagctagc
agacctcccccagcagctgcacctccaactggtccaacggcacagcagcatcagcagcag
cagcagcagcagcagatgatgtcgcagatggctgctcaaggtacagacccatcacagatg
gcaagcatggatccagctgctgtgcagcaatactaccagtattactatcaatattggcag
cagtaccagcaacaagcagttgctgcagcccctgcacaatag
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