Anneissia japonica (feather star): 117116111
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Entry
117116111 CDS
T08613
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03013
Nucleocytoplasmic transport
ajc03015
mRNA surveillance pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117116111
09122 Translation
03013 Nucleocytoplasmic transport
117116111
03015 mRNA surveillance pathway
117116111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117116111
03041 Spliceosome [BR:
ajc03041
]
117116111
03009 Ribosome biogenesis [BR:
ajc03009
]
117116111
03012 Translation factors [BR:
ajc03012
]
117116111
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117116111
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117116111
mRNA cycle factors
Stress granule specific factors
117116111
Spliceosome [BR:
ajc03041
]
Complex C
Other components
EJC/TREX
117116111
Ribosome biogenesis [BR:
ajc03009
]
Eukaryotic type
90S particles
Helicases
117116111
Translation factors [BR:
ajc03012
]
Eukaryotic type
Initiation factors
eIF-4
117116111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
TniB
Motif
Other DBs
NCBI-GeneID:
117116111
NCBI-ProteinID:
XP_033115963
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MASSNRRVLPVDDSNITFETSEDVIVTPTFDSMKIREDLLRGIYAYGFEKPSAIQQRAIK
PVTKGRDVIAQAQSGTGKTATFSISILQMLDTQVRETQALVLSPTRELAVQIQKVVLALG
DYMSVQCHACIGGTSIGEDIHKLDYGQHVVSGTPGRVFDMIRRRHLRTRSIKMLILDEAD
EMLNKGFKEQIYDVYRYLPPATQVVLFSATLPHEILEMTHKFMTDPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDAIMKEFRAGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
YGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttccaatcgacgtgtgttgccagtagatgattccaatattaccttcgagaca
agcgaagatgttattgttacgccgacatttgactctatgaaaatacgagaagatcttctt
aggggaatttatgcatatggatttgagaaaccttcagccattcaacagagagcaatcaaa
cctgtaacgaaaggcagagatgttattgcacaggcacagtctggtacaggtaaaactgct
acgttctccatcagcattctacagatgctagatacgcaagtgagggagacgcaagcactt
gtgctgtctccgacgcgtgaattagcagtccaaattcagaaggttgtgttagctttaggt
gattacatgagcgtacaatgccacgcctgtatcggtggaacaagcataggagaggatatt
cacaaactagactacgggcagcacgtggtgtctggaacccctggcagagtttttgacatg
atccgaaggcgacacttacgaacaagatccatcaagatgctgattcttgatgaggccgat
gaaatgttgaataaaggttttaaggagcagatctatgatgtgtacaggtacttaccgcca
gcaacacaagtggttctgttcagtgctacactgcctcacgaaatccttgagatgacacac
aagttcatgacagacccaatcaggatcctggtcaaacgtgatgagttaactttggaaggc
atcaagcaattcttcgtagctgttgaacgcgaggaatggaagttcgacacgctctgtgac
ctctacgacaccttaaccattacacaggctgttatattctgcaacacaaagagaaaggtt
gattggctgacggagaaaatgagggaagcaaacttcacagtgtcatcgatgcatggagac
atgcctcagaaagaacgtgacgccattatgaaagagttcagagccggagctagtcgtgtg
ttaatcacaaccgatgtatgggctaggggcatagacgtgcaacaagtgtctctggttata
aactacgacttaccaaacaatcgtgagttgtacatccacaggatcggtcgttcaggacgt
tacggcaggaagggtgttgcaatcaattttgtgaagagcgatgacatcaggattttacga
gatattgagcaatactacagtacgcaaattgacgagatgccaatgaatgttgctgatctg
atctag
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integrated database retrieval system
