Anneissia japonica (feather star): 117116704
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Entry
117116704 CDS
T08613
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117116704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ajc03000
]
117116704
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ajc03310
]
117116704
Transcription factors [BR:
ajc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117116704
Nuclear receptors [BR:
ajc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117116704
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
tRNA_bind_3
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
117116704
NCBI-ProteinID:
XP_033116695
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All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MDSMSELDSISPISAMSSVQCPTTTMGSSPLSAHSHSGLGSPPMSHPLGHMQSPNLSSMS
SASSHEDIKPVISNPVIYAPPHSSMPGIPHLQIPGGHSMSSSQLSGGATSPMGQMPGQSI
HKSICAVCGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACRDERNCIVDKRQRNRCQYC
RYQKCIAMGMRREAIVLTAVQEERQRKDKCSGDGEVESTSGSNNDMPVEKILEAELAVEP
NTDTYVDTQNDPVTNICQAADKQLFTLVEWAKRIPHFSELILDDQVTLLRAGWNELLIAA
FSHRSIAVTNGILLATGLHVHRNSAHTAGVGTIFDRVLTELVAKMREMRMDKTELGCLRA
IVLFNPDAKNLTSVQKIIHNARRVATDPMNSLPFVYSTDAKNLSSVQKVEELREKVYASL
EEYCRTQYPEESGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPNN
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggatagtatgtcagaattagattcaataagtcctatatcagccatgagttcagtacag
tgtccgaccactaccatgggttcctcgcctctctctgcacattcacatagtggtctcggt
tcaccgccaatgtctcacccgctcggtcacatgcagtcaccgaatttatcaagcatgagc
tcggcatcatcacatgaagacattaaaccggtcatctcaaatcccgttatctatgctcca
ccgcattcgtccatgccagggataccccacctccagatcccaggtggtcattctatgtcc
tcaagccaactctccggtggagccacttctccgatgggacagatgccaggacaaagcata
cataaaagcatttgtgctgtgtgtggagatcgtgcatcgggcaaacattatggtgtgtat
agctgtgaaggatgtaaaggattcttcaaacgaacagtacgtaaagatttatcatacgcc
tgccgagatgaaagaaactgcatagtagataaacgtcaaaggaatcgatgccagtattgc
agatatcaaaagtgtattgccatgggaatgagaagagaagccattgttttgacagccgtt
caagaagagaggcaacgcaaagacaagtgcagtggagatggggaggttgagagcactagt
gggtcgaacaatgatatgccagtagagaagatactggaggctgagttagctgtagaacca
aacacagatacatatgttgacacacagaatgacccagtgaccaacatatgtcaggctgca
gataaacagttgttcacattggtggaatgggccaagaggattcctcatttctcagagcta
attctagatgatcaagtgacactccttagagcaggatggaatgagttattaattgctgct
ttctcacatcgctccattgctgttacaaatggaatccttttggcaaccggtttacatgta
caccgaaacagcgcccatacagccggtgttggcactatatttgaccgtgtcctcacagaa
cttgttgccaagatgagagaaatgagaatggataaaacagagcttggctgtctcagggcg
atagtccttttcaacccagatgccaagaatctaacctcagtacagaaaatcatacataat
gccaggcgtgttgctacagatccaatgaacagtcttccctttgtttattcaacagatgcg
aagaatctctcctcagttcagaaagtggaagagctacgggagaaggtttacgcatcactg
gaagagtactgtcggactcagtatccggaggagtctggcaggtttgctaaattgcttcta
cgattaccagcgctacgatccatcggacttaaatgcttggaacatctcttcttttttaaa
ttgattggtgacacccctattgatacatttctaatggaaatgttagaggcacctaataat
agctaa
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