Anneissia japonica (feather star): 117117934
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Entry
117117934 CDS
T08613
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03018
RNA degradation
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117117934
09123 Folding, sorting and degradation
03018 RNA degradation
117117934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117117934
03041 Spliceosome [BR:
ajc03041
]
117117934
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117117934
mRNA degradation factors
5'-3' decay
Lsm complex
117117934
Spliceosome [BR:
ajc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117117934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
117117934
NCBI-ProteinID:
XP_033118309
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVACDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVVSKGRGRGGGGRGRGRGGPGRGAFGGRGGGRGGRGGG
RGGGPNRGGGPRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgcttccgttatcgctcctgaggaccgcacagaatcatcccatgctagttgagttaaag
aatggagaaacctacaatggccatcttgtagcctgtgacaattggatgaacattaacctg
agggaagttatatgtacatcaagggatggtgatagattttggagaatgccagaatgctac
atacgtggtagcacaataaagtacctcagaattccagatgaagttattgacatggtcaaa
gaagaggtcgtttcaaaaggcaggggtcgaggaggtggaggtcgaggacgaggaaggggt
ggaccaggaaggggagcatttggtggacgtggcggtggtagaggcggacgtggtggagga
cgaggcggtggccctaacagaggtgggggaccaagaagatga
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integrated database retrieval system
