KEGG   Anneissia japonica (feather star): 117118072
Entry
117118072         CDS       T08613                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03030  DNA replication
ajc03410  Base excision repair
ajc03420  Nucleotide excision repair
ajc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117118072
   03410 Base excision repair
    117118072
   03420 Nucleotide excision repair
    117118072
   03430 Mismatch repair
    117118072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ajc03032]
    117118072
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117118072
Enzymes [BR:ajc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     117118072
    6.5.1.6  DNA ligase (ATP or NAD+)
     117118072
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     117118072
DNA replication proteins [BR:ajc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    117118072
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     117118072
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     117118072
   NER (nucleotide excision repair)
    Other NER factors
     117118072
   MMR (mismatch excision repair)
    Other MMR factors
     117118072
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 117118072
NCBI-ProteinID: XP_033118455
LinkDB
Position
Unknown
AA seq 1070 aa
MAQRSIMSFFGSSGMKKTSTGTEKKRERSPLKVKNKSPDKSPITEQPKKKMRRILDSDEE
EEEENVGKQVREEKELSKQEDKEGKQEDEEAGKHKDKCEKICAEKKAEGSKKEKMETNTD
GEHSSKIGQQSPSENKKFASPSSVNGTPGTSSPEYTPTISPGSIPLRKTARKHMRKRTLN
PPETHNSTPDDVEKPSNEVKEEIKEEIKEERKESDNSVPETSMPKSPTIKKEIVDKCSKS
DENDSEEDQVEKKKAKVQKKSKKDTPSSKGRMVKLPENIKAEIRDVKTPKGKKKLSSNES
QKSIAEQEDEEETANDSQEEKSTKAKKRKRKQIIESDDDEEEEEKLDVDKEMKTSPKVKK
EVEKSPVHPFFSTKTPKRELADKQKDNKDDTPVKTKKEISTPAKPVGAGDSSDKKVTDVN
YNPGKSNYNPILDACWKQNEKVPYLALARTFEQIEATTKRLKTIEILCNFLRSVIALTPE
DLVKCIYLCLNKLAPAYEGLELGMGETILMRAIGQATGRSVDKMKAEVAEKGDLGIVAET
SRSTQKMMFAPPKLTIQGVFAKLREIAAMTGNASQNRKTEKVKGMFVACRHSEARYLIRS
LTGKLRIGLAEQSVLVALGNAVVLTPPGQDIDVKQQTTISDTMRKKMEEGALIIKTTYCE
LPNYDKIIPTLLEHGLEELPKHCKLTPGTPLKPMLAHPTKGISEVLNRFENMTFTCEYKY
DGERAQIHLLENGEVHIYSRNQENNTSKYPDIIERIPGILTEGVTSCVIDSEAVAWDKEK
KDILPFQVLSTRKRKDADMSQIKVQVCVYAFDLLYLNGQSLVKEPFRRRRELLHSSCKEV
EGQFVFAKSMVSTETEDIQEFLDESIKGNCEGLMVKTLDEEATYEIAKRSHNWLKLKKDY
LDGVGDTLDLVVIGGYRGKGKRTGTYGGFLLACYDDENEEFQSICKIGTGFKDEDLDKHT
KFLTDHLIDKPKAYYRYDTSHEPDHWFDAVQVWEVKAADLSISPTHRAAMGIVDPSKGIS
LRFPRFLRIREDKRADEATNASQVAELYNNQDQVKNQKASTTKANPDDFY
NT seq 3213 nt   +upstreamnt  +downstreamnt
atggcccagagatctattatgtcatttttcggttcaagtgggatgaagaagacttctact
ggcactgaaaaaaagagagaaaggtcaccactgaaagtgaagaacaaatccccagataaa
tcgcccatcacagagcaaccaaagaaaaagatgcgccggatcctggacagtgatgaagag
gaagaggaagagaatgttggcaaacaagttagagaagaaaaggaattgagcaagcaggaa
gataaggaaggcaaacaggaggatgaggaagcaggaaaacacaaggataaatgtgaaaaa
atatgtgcagaaaagaaggcagaaggaagcaagaaagaaaaaatggaaacaaatactgat
ggcgaacattcttcgaaaataggacaacaatcaccgtcagaaaacaaaaaatttgcatct
ccctcatcagtgaatggaacacctggaacttcatcaccagaatatacaccaactatttca
cctgggagtattccacttagaaaaacagcacggaaacacatgcgaaagcgaactttaaac
cctccagaaacacataacagcacccctgacgatgttgaaaagccatcaaatgaagtaaaa
gaagaaataaaagaagaaataaaagaagaaagaaaggaatcggataatagtgttccagaa
acttctatgccaaagtcaccaacaattaaaaaggagattgtagacaagtgtagtaaaagt
gatgaaaatgatagtgaagaagatcaagtggagaagaaaaaagccaaggtgcaaaagaag
tcaaagaaagacaccccatcgtcaaaaggaagaatggtaaaactaccagagaacataaaa
gcagagattagagatgtgaagactccaaaaggaaaaaagaaattgtctagtaatgaaagt
caaaagtccatagctgaacaggaagatgaagaagaaactgcaaatgacagtcaagaagag
aagtcaacaaaagcaaagaaaagaaagagaaagcaaattatagaaagtgatgatgatgag
gaggaagaagaaaaactagatgttgacaaggaaatgaaaacttctccaaaggtgaagaaa
gaagttgagaaaagtcctgtacatccattcttttccacaaagacaccaaaaagagagttg
gcagacaaacagaaagataacaaagatgacacgcctgtaaaaacaaagaaagagataagt
acaccagccaaacctgtcggagcaggagactcaagtgataagaaagttactgatgttaat
tacaaccccgggaagagcaactataacccaattctagatgcttgctggaagcaaaatgaa
aaagtaccatacctagccttagcccgaacatttgaacagattgaagccacgacaaagcgt
ttgaaaaccattgagattctatgcaacttcctacgatcggtcattgccctcactccggaa
gatcttgttaagtgcatctacctctgcttgaataagcttgcaccagcttatgaaggccta
gaacttggcatgggagaaactatacttatgagagctataggccaagctacaggccgcagt
gttgataaaatgaaggcagaagtagctgagaaaggggaccttgggattgttgctgagacc
agccgctcaacacagaaaatgatgtttgcaccgccgaagctgacaattcagggagttttc
gcaaaattacgagaaattgcagcaatgactggcaatgcttctcaaaatagaaaaactgag
aaagtaaagggaatgtttgtagcctgtcgccactctgaagcaagatatctcataaggtca
ttgactggtaaactgaggattggtctggctgaacagtctgtcttggttgctcttggcaac
gctgttgtcctaactccacctggccaagatattgatgtaaaacaacaaactacaatctcc
gacaccatgcgaaagaagatggaagagggagccttaatcatcaagactacttattgtgaa
ctcccaaactatgacaagatcattcccacattattggaacatggcctagaggagctacct
aagcattgtaaattgacacctggaaccccattgaagcccatgttagcccatccgaccaag
ggaatatcggaggtgttgaaccgatttgagaatatgacgtttacatgcgagtacaagtat
gatggtgaacgagcacagatccatctcctggaaaacggagaggttcacatatacagtcgg
aaccaggagaacaacacctccaagtatcctgacatcattgagaggatcccaggcatcttg
accgaaggtgtcacgtcttgtgtgatagactcggaagctgtggcatgggacaaagagaag
aaggacatccttcccttccaggtccttagcaccaggaagaggaaggatgcagatatgtca
cagatcaaagttcaagtgtgtgtttatgcatttgaccttctgtacttgaatggacagtca
cttgtcaaggaaccatttcgcagacgacgagagctcctacactcttcctgtaaggaagtg
gaagggcagtttgtttttgccaagtccatggtgtcgactgagacagaggacattcaagaa
tttcttgatgagtccattaaaggcaactgcgaaggcctaatggtcaaaacattagacgag
gaagctacatatgaaattgcaaaacggtctcataattggttgaagctcaaaaaagattat
ttagatggtgttggcgatactttagatctggtggtgattggtggttaccgaggcaaagga
aaacgcaccggaacatatggaggattccttctggcttgttacgacgacgagaatgaagaa
tttcagtctatatgcaagattggcacaggttttaaagatgaagaccttgacaagcacaca
aagttcttaaccgatcacctaatcgacaaaccaaaggcgtactaccgctatgatacaagc
cacgagccagatcactggtttgacgctgtccaagtctgggaggtgaaggcggcagattta
tccatatcccctacgcatcgtgccgcaatgggcatcgttgatccaagtaaaggaatatct
ttgcgctttccacgtttcttgaggatacgagaggataagagagcagacgaagcaacaaat
gcttcacaggttgctgagttgtataataatcaagaccaggtgaagaaccaaaaggccagt
actactaaggcaaatcctgatgacttctattga

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