Anneissia japonica (feather star): 117118610
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Entry
117118610 CDS
T08613
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117118610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117118610
03041 Spliceosome [BR:
ajc03041
]
117118610
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117118610
Spliceosome [BR:
ajc03041
]
Complex B
Other components
Prp19-related factors
117118610
Complex C
117118610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
ARM_TT21
TPR_12
RPN7
ARM_TT21_C
TPR_1
DHR-2_Lobe_A
TPS
AbiH
Motif
Other DBs
NCBI-GeneID:
117118610
NCBI-ProteinID:
XP_033119135
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MRRKRFTNVCLIFDFTSCICTCKWYIQTKRPICGNINMPELKNKENLMFEEDDLPYEEEI
LRNPYSVKCWQRYIEHKAEGSSAPLNLIYERALKELPGSYKLWYNYLKVRRKQIRGRCIT
DPAYEDVNNAFERGLVFMHKMPRIWLDYCQFLMDQSKIIRTRRTFDRALRALPITQHKRI
WPLYLKFICMHPLYETAVRVYRRYLQLSPEDAEKYIDYLISIDRLDEAAVRLAGVVNDDK
FVSKKGKSTHQLWHDLCDLICKNPTKVKSLKVDPIIRQGIKRFTDERGQLWCSLADYYIR
SGHFEKARDIYEEAIQTVTTVRDFTQVFDAYAQFEEGMISARMETTSDLGPTEEDDIDLD
LRLERYEYLMERRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPRDVINTFTEAVQTVQPN
LATGKLHTLWVEFAKFYESHDQLAEARVIFEKGTKVEYVKVEDLASIWCERAEMEIRHEN
YKEALKLMQRATALPGRKAAYYDKSEPVQNRLYKSLKVWSMYADLEESFGTFKSTKSVYD
RIIDLRIATPQIIINYGMFLEENNYFEDAFKGYEKGIALFKWPNVYDIWNTYLTKFIKRY
EGKKLERARDLFEQCLEDCPAKFAKALYLLYAKLEENYGLARHAMAVYERATKAVLPTEQ
YEMFNIYIRRAAEIYGVTHTRTIYETAIEVLGDDQARDMCVRYADLERKLGEIDRARAVY
AHCSQMCDPRTTASFWQTWKEFEIKHGNEDTVREMLRIKRSVQATYNTQVNFMSAQMLSA
SSQPTPGTVSDLGSGGLDDMKILEQRAQALAAEAEADKPKTKKDILFVRGDTKATNEELE
AAARTTNPEEIAIDSDDDDEREADVDEVNIEEQSVPSEVFGGIKNND
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaaaacgtttcaccaacgtttgccttatttttgatttcacgagttgtatttgc
acgtgtaaatggtatatacagacaaaaagacccatctgtggaaacatcaacatgccagaa
ttaaagaataaagagaatttgatgtttgaagaagatgatcttccatatgaagaagaaatc
ctccgtaatccatattcggtgaagtgttggcagcgttacattgagcacaaagccgaaggg
tcatcagcccctctcaacctgatttatgaacgtgctctgaaggagctaccaggaagttac
aagttatggtacaactatttgaaagttcgtcgcaagcagatcaggggacggtgtataact
gaccctgcctatgaggatgtcaacaatgcatttgagagagggttggtgttcatgcacaag
atgcctcgtatttggttggattattgccagttcctgatggaccaatccaagatcattagg
actaggcgtacgtttgacagagcattaagggcgctgcctattacacaacataaacgtatc
tggccattatacctgaaattcatatgtatgcaccctttgtatgagacagctgtaagggta
tacaggcgttatctacagttgtctccggaggatgctgagaaatacattgattacctaata
tcaatagatcgtctggatgaagctgcagttcgactagcgggcgtggttaatgatgacaag
tttgtttccaagaagggaaagtctacccatcagctgtggcatgatctttgtgacctcata
tgcaaaaatcctacaaaggtcaagtccctgaaggttgaccccatcatccgtcaggggatc
aagcgtttcaccgatgaacgaggtcagctctggtgctcccttgcagattactacatcagg
agtggacactttgagaaagcacgcgatatatatgaagaagccattcagactgttaccact
gtaagagacttcactcaggtgtttgatgcatatgcacaatttgaggaaggcatgatcagt
gccagaatggagactaccagtgatttgggaccaacagaagaagatgacattgacctcgac
ttacgccttgagcgctatgagtacttgatggaacggcgtcctctgttgttgaatagtgtc
ttgttacggcaaaatccacataatgtgcacgagtggcataaacgagttaaattatacgaa
ggaaaaccaagagatgtcatcaatacattcacggaggcggtgcaaacagtgcagcctaac
ctagccactggtaaacttcatactttatgggttgaatttgctaaattctatgaaagccat
gatcagttagcagaagctagagttatttttgagaaaggaacgaaagtggaatatgtgaaa
gtagaggaccttgcaagtatctggtgtgagagagcagagatggaaataaggcatgagaac
tacaaggaggccttgaagttgatgcaacgggcaacagctctcccaggaagaaaggcagca
tattatgataagagtgaaccagtgcagaaccgtttgtacaagagcttaaaggtttggtcc
atgtatgcagatctggaggaatcatttggaacctttaagtctaccaaatctgtgtatgac
cgaatcattgacctgagaatagcgactccacaaataatcatcaactacggaatgttcctg
gaggaaaacaactattttgaagatgctttcaaagggtacgagaagggcattgcactattc
aagtggcctaacgtttatgacatatggaacacctacttaacaaaattcatcaaaagatac
gagggaaagaagctggaaagagctagagatttgtttgagcagtgccttgaagattgtcca
gccaaatttgctaaagcattgtatttactctacgccaaattggaggagaattatgggtta
gctaggcatgcaatggcagtctatgagcgagcaaccaaggcagttttaccaactgagcaa
tatgagatgttcaatatatacatcaggagagctgcagagatttatggtgtaacacacact
aggaccatttacgagacagcaattgaagttcttggggatgatcaggcacgggatatgtgc
gtacgttatgcagatttggagcgcaaactcggagagattgatcgagctcgtgcagtgtat
gctcactgttcacaaatgtgtgatccgaggactaccgcctcgttttggcaaacctggaaa
gagtttgagatcaaacatggaaatgaggacaccgtgagggaaatgttgcgaattaagcgc
agcgtacaagccacctacaatactcaggtcaacttcatgtcagcacagatgctgtctgct
tccagccaaccaacacctggtacagtctctgacctgggatcaggtggtctggatgatatg
aagattctggagcagagagctcaagcactggctgccgaagcagaggcagacaaaccaaaa
accaaaaaggatatattgtttgtcaggggcgacactaaggccaccaatgaagagttggag
gccgcagcaagaacaaccaaccctgaagagatcgcaattgacagcgatgatgatgatgaa
agggaagctgatgtcgatgaggtcaacatcgaggagcagtcagttccatctgaagttttt
ggtggaattaaaaacaatgattaa
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integrated database retrieval system
