Anneissia japonica (feather star): 117119421
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Entry
117119421 CDS
T08613
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117119421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117119421
Enzymes [BR:
ajc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117119421
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117119421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FAIM1
Motif
Other DBs
NCBI-GeneID:
117119421
NCBI-ProteinID:
XP_033120133
LinkDB
All DBs
Position
Unknown
AA seq
1394 aa
AA seq
DB search
MPASSFTLLIWQLVGLSRSQVCFGVMSAAQMRQQAHLHVVSKRLYQQESHTPVPFGVLDH
RMGTSEKSNECLTCMKPLSDCIGHYGYIDLELPVFHIGFFRSIITILQVICKNCSRVLLQ
PHDRKNFLETLQRPGLTYLQKRGLKKKINEKSRKTRICPHCEMPNGPVKKCAMLKIVHEK
FKITKKKLDPAVEQFHAEFSIASENNKEIDGLLNKAQESLNPLTVLNLFKRITDEDMPLL
VMNSENSRPQDLILTRLLVPPLCIRPSVITDLKSGTNEDDITVKLTEIIFLNDVIKKHRQ
AGAKMAMIMEDWDFLQLQCALYISSETTGIPLNMQPKKPTRGFCQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLRIDEVAVPVHVAKILTYPEKVTNYNKKLMQKLVTNGVDVHPGA
NFIQQRFTNVKKFLKYGNKQKIAQELKYGDIVERHLMNGDIVLFNRQPSLHKLSIMAHYA
RVMPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALTLMGVKSNLVTPRNGEPL
IAAIQDFITGAYLLTQKDTFFDRTKACQLAASILSQADKDLRIELPPPAIIKPVRLWTGK
QIFSLILRPSRKCSLKVNLRAKGKNYSNKGDMCHNDSFVVIYNSELLCGAMDKLTLGSGS
KNNVFYILLRDYGEQAAADAMSRLARLCPAFLSNRGFSIGIGDVTPGEGLLRAKKNLLDD
GYSKCDEYIRELEAGKLQSQPGCTPEQTLEAIILKELSVIRDHAGKACLKELHKSNSPLN
MALCGSKGSFINISQMIACVGQQAISGKRIPNGFEDRALPHFRRHSKIPAAKGFVKNSFY
SGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCAHYDLTVRNSMGDIIQ
FIYGGDNLDPAVMEGKDKPVDLERVLSHIKAKYPCKAEKTLTSPLIKETSTEILESKEYA
HFSMKFCISCRLFVDEMCKKLKGCRELYGLSEEQTEKNILYQLERVTTTQLKEFFDMCRV
KHLRAKMEPGTAVGAVAAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLEDKTDPEFARRVKGRIEKTKLGEVTEYLEEVVLPDRCFILIKLDLERIKLL
KLEVSPEKIRAKICGARIKVKFEHIEILNERLITVEPQESAKSSMYYTLQSLKQTLPKVV
IQGIPEVSRAVIHIDEKAGRKQEYKLLVEGDNLRAVIGTKGVYGTKCFSNNTYEVEKTLG
IEAARRCIMDEVQYTMVSHGMSIDCRHVMLLADLMTYRGEVLGITRFGLAKMKESVLMLA
SFEKTADHLFDAAYHGQKDVICGVSECIIMGIPMTIGTGNFKLLHKAQREINPTKRSLVF
DVPEFHIPGASSSL
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctcctcttttacgctgctaatctggcaattagtcggtttatccagaagccaa
gtatgctttggtgtgatgtcagcggcacagatgcgacaacaggcccatcttcatgttgtt
agcaagcgtttgtaccagcaagagtcgcacactcccgtaccgttcggagtgcttgatcac
agaatgggaaccagtgagaaaagtaatgagtgtttgacttgtatgaagcctctttcggat
tgcattggtcactatggttatatagacctagaactgcccgtcttccatatcggattcttc
cgctctataataacgattcttcaggtcatttgcaagaattgtagtcgagttctgttgcaa
ccacatgacagaaaaaatttcttggaaactcttcagcgccctggattaacgtaccttcaa
aagcgtggtctcaagaagaaaatcaatgaaaaaagtcgcaaaacacggatctgcccgcac
tgtgaaatgccgaatggtcctgttaaaaagtgtgcaatgctgaaaatcgttcatgaaaag
tttaaaattactaagaagaagctcgaccctgctgtagagcagttccatgcagaatttagc
attgcatcagaaaacaacaaagagattgatggcctactcaataaagctcaggaaagtttg
aacccattgactgtattaaacctgttcaagcgcatcacagacgaggatatgccacttctg
gttatgaacagcgagaattctcgacctcaggatttaatactcacaagactgctggtaccc
cctctctgtattcgaccatcagtaataacagatctaaaatctggaacaaatgaagatgac
ataactgtaaaattaactgagattatatttctgaatgatgtgatcaaaaaacataggcaa
gctggagccaagatggcaatgattatggaagattgggatttcctgcaactgcagtgcgcc
ctctacatcagcagtgagacgacaggaattccactgaacatgcagcccaagaaacccaca
agaggattttgtcagaggttaaagggcaagcaagggcgtttccgtggaaatctatcgggc
aagagggtagatttttccagccgaactgttatctcaccagatcctaatctacgcattgat
gaggtagctgtacctgttcatgtggcaaagattctaacctatccagaaaaggtaacaaat
tacaataagaagctgatgcagaaacttgtgacaaatggagttgatgtacatccaggagca
aactttatccaacaaagatttacaaacgtgaaaaagtttcttaaatatggcaacaaacag
aaaattgctcaagaattgaagtatggtgatattgtggaacggcatctaatgaatggagat
attgtcttgttcaaccgtcagccgtccttgcacaaattgagtatcatggcccattatgca
cgtgtaatgccgcacaggaccttccgcttcaacgagtgtgtgtgtactccgtacaacgct
gattttgatggcgatgaaatgaacctacatttgcctcaaactgaagaagcaaaagctgaa
gccttgacacttatgggggtgaaaagcaacctagtaacaccaaggaatggagagcctctg
attgctgcaatacaggacttcattacaggtgcttaccttctcactcagaaggacacgttt
ttcgaccgtacgaaagcttgtcaactagcagcgtctattttgtctcaagcggataaagat
ctaagaattgaactgcctccccctgctatcatcaagcctgtcaggttgtggacaggcaag
cagatcttcagcttaatcctccgtccaagcaggaagtgctcgctgaaagtgaacctgcgt
gccaagggcaagaactacagcaacaaaggagatatgtgtcacaacgattcgtttgtggtt
atttacaacagtgaacttctgtgtggtgctatggataaactaactctaggctcgggctcg
aagaataatgtattttacatcctactgcgtgattatggtgagcaggcagccgcagatgcg
atgagtcgccttgcaaggctctgcccagcattcttatctaatcgtggtttctctatcggc
attggtgatgtcactcctggcgaaggccttctcagagctaagaaaaacctgctggatgat
ggatattctaaatgcgatgaatacattcgtgagcttgaggctggtaagctgcagagccaa
ccaggctgcacacctgaacaaacccttgaggccatcatcttgaaggaattgtctgtgatt
cgtgaccatgcaggtaaagcatgtttgaaggaactacacaagagcaacagccccctcaac
atggcactttgtggatcaaaaggatcattcatcaacatttctcagatgatagcgtgtgtt
ggccagcaagctatcagtggtaaacgcattccaaatggctttgaggatcgtgcactacct
cactttcgaagacattccaagattccagcagccaaaggatttgtgaagaatagcttctat
tcagggctgactcccactgagtttttcttccacactatggcaggcagagaaggattggtt
gacacagctgttaaaactgcagagacaggctacatgcagcgacgactagtcaagtctctt
gaagacctctgcgctcactatgacttgactgtacgtaactcgatgggtgacatcatccag
ttcatatatggaggcgataaccttgatcctgccgttatggaaggcaaagacaaacctgtt
gatctagaaagagtcctgtcacacatcaaggccaagtatccgtgtaaagctgagaagact
ttgacctctccactaataaaagagacatccacagaaattctggaaagcaaagagtatgcc
cattttagtatgaaattttgtatttcttgtagactatttgtagatgagatgtgtaagaaa
ctaaagggttgtagggaactttatggattgagtgaagaacagacagaaaaaaacattttg
tatcagcttgaaagagtgaccacaacacagctgaaagagttctttgatatgtgtcgggtg
aagcacctaagagccaagatggaacctggaacagccgtgggagcagtggcagctcagagt
attggagaaccaggaactcagatgacgctcaagactttccattttgctggtgtagcatct
atgaatattactctaggtgttccacgcatcaaggagattataaacgcatccaaaaacatc
agcacacctatcataacggcccacctggaagacaaaacagatcctgagtttgcacgtaga
gtcaaaggtcggattgaaaagactaagttaggagaggtaactgagtacttagaagaagtg
gttcttccagatagatgttttatactcatcaagctggacttagagaggatcaagcttctc
aagcttgaagtatcacctgagaaaattagagccaaaatctgtggtgccagaattaaggtc
aaatttgagcatattgaaatcttgaatgaacgtctgataacagtggaacctcaggaatca
gccaagagttcaatgtattatacactacagtcactcaaacagacactccctaaggtggtt
atacagggtattccagaagtatcaagagcagtaattcacattgatgaaaaggctggtcgt
aaacaagaatacaaacttctcgttgagggcgataacctccgagccgtgataggaaccaaa
ggcgtttatggaaccaaatgtttttccaacaatacttacgaggtagagaaaacattaggg
attgaagctgcaagaaggtgtattatggatgaggttcagtacacaatggtcagccatgga
atgagtatagactgtcgacatgtcatgttgttagctgatctgatgacctacagaggtgaa
gtgcttggcatcaccaggtttgggttggcaaagatgaaagaaagtgtactcatgttggct
tcatttgagaaaactgctgatcatctatttgatgctgcatatcatggacaaaaggatgtc
atttgtggcgttagtgaatgtatcataatgggaataccgatgacgattggcacaggcaac
ttcaaattactacacaaagctcaaagggagatcaatcctacgaaaagaagcctggtcttc
gatgttcctgagttccatatcccaggtgcgtcgtcatcattgtaa
DBGET
integrated database retrieval system
