Anneissia japonica (feather star): 117120096
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Entry
117120096 CDS
T08613
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03015
mRNA surveillance pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117120096
09123 Folding, sorting and degradation
03018 RNA degradation
117120096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117120096
03041 Spliceosome [BR:
ajc03041
]
117120096
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117120096
mRNA cycle factors
Stress granule specific factors
117120096
Spliceosome [BR:
ajc03041
]
Complex C
Other components
Complex C specific factors
117120096
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_MARF1
RRM_5
RRM_occluded
SET_assoc
RRM_10
SGT1
Motif
Other DBs
NCBI-GeneID:
117120096
NCBI-ProteinID:
XP_033120995
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MTGHASNSCASLYVGDLNPDVTEVMLFEKFSTAGPVLSVNVCRANTKHPLGYAYVNFLHA
EDAERAIETMNFDVINGHPIHIAWSQRDPTLRRTGKGNVFIKNLDKSIDDKALHDIFSAF
GNILSSKATQDLNDFHLDGRTLYVGRAQKKAERQAELKQKYEQLKAERNNRSQGVNLYLK
NLDDEIDDKRLQKEFEKFGTITSAKVMTDEKGISKGFGFVCFSSPEEATKAVTEMNGRTI
ATKPLYVALAQRKEERKAQLAAQHMQRIAGIRVPGNAQQINQVFNPGFGYFTQAVYPPQA
RLYPTGQMTQIRNPRWTGANQPRSAGQPSGGFQPMPNTCQFAPRGGYPAIRTANPARVPI
RQQYQQHVTGVIPQSAIRVPAIQRIPTVPAQQRQVKYANAVRNQTVASQSAGIPVDFPHQ
AVQVPLQEPLTPSRLAQATPQEQRQMLGERLYHIIQPSHGDLAGKITGMLLEIDNAELLH
ILESRDSLSAKVDEAVIVLKAHQAKESRNKHALAAIAQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgactggtcatgcctcaaactcatgtgcctcgctgtatgttggagatttgaatcctgat
gttacagaagttatgctatttgaaaagttctcaacagctgggcctgtattgtctgtaaat
gtatgtcgtgccaacaccaaacatcctcttggctacgcctatgttaattttctgcatgct
gaagacgctgaaagagcaattgaaactatgaactttgatgtcatcaatggtcatcctatc
catattgcgtggtctcagcgtgatccaactttgcgtcgtaccggcaagggtaatgttttc
ataaagaacctggacaaatcaatcgatgacaaagctcttcatgatatattttctgctttt
ggtaacatcttgtcttctaaggccacccaggatctgaacgattttcatttggatggtcgt
actttgtatgttggacgcgcacagaagaaagcagaacgtcaagctgagcttaaacagaaa
tatgaacaactgaaagcagagagaaacaatcgttctcagggtgttaacctttacctaaag
aaccttgatgatgaaattgatgacaagcggttgcagaaagaatttgaaaagtttggtact
attacaagtgcaaaggttatgactgatgaaaagggaatctcaaaaggatttgggtttgta
tgtttttcgtcccctgaagaagcaactaaggctgttactgagatgaatggaagaaccatt
gctactaaacctctgtatgtagcactagcacagcggaaagaagagcgtaaggcacagctg
gccgcccaacacatgcaacgtattgcagggattagagttcccgggaatgcacaacagata
aaccaggtgtttaacccagggtttgggtactttactcaagctgtttaccccccacaagca
cgattatacccaacagggcagatgacacaaatcagaaacccaaggtggactggtgctaac
caaccaagatcagctggtcaaccaagtggaggcttccagcccatgccaaatacttgtcag
tttgctccaagaggaggctacccagccatccgcactgccaatcctgctagagtccctatt
cgccagcagtaccagcagcatgtgacaggagtgattcctcagtctgctatccgtgttccc
gccattcaaagaattccaactgtaccagctcaacaacgccaagtgaagtatgctaatgct
gtgcgcaatcagactgttgctagtcagtctgctggaattcctgtggattttccacatcaa
gctgtccaagttcctttgcaggagccactaaccccatccaggctggcacaggccaccccc
caggagcagaggcagatgttgggtgagcgattataccacattattcaacctagccatgga
gacctagctggtaagatcactggaatgttgttggagattgacaacgctgagttgcttcac
atattggaatcccgtgactcattgagcgcaaaggttgacgaggctgtgattgtgttgaag
gctcaccaagctaaggaatctcgtaataaacacgctctggccgctattgcacagtaa
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