KEGG   Anneissia japonica (feather star): 117121435
Entry
117121435         CDS       T08613                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117121435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ajc03041]
    117121435
Spliceosome [BR:ajc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    117121435
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st PRP4 ANAPC4_WD40 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT122_1st WD_LRWD1 WD40_like WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR19_1st Nuc_deoxyrib_tr
Other DBs
NCBI-GeneID: 117121435
NCBI-ProteinID: XP_033122534
LinkDB
Position
Unknown
AA seq 499 aa
MSEDDSGPAFKKQKVHYGTLEETLRKEGGDDAIASGILAGNINISKGETFNLEEHTSEQK
KNLLAEFARRKRARTLHVSTDDSMVKAKLREIGEPICLFAEDAADRRERLRQKLSQVGLT
EFKGIRQEAEKEKKQKEENNKTWYHEGPQSLKSARMWIAEYSLPRAQKRIAESRLAVKIP
ETVRHAKKQELHNRLRNITAIGSEIGDTRPISFCRFSPNSQVLAMTSWSGLIKLWSVPEF
QPIRTLRGHTNNVGGIAFHPEATVGRDESMFCMASCATDGSVKLWSMDSEEPLANVEGHD
ARVARIEFHPSGRFLGTACYDKSWRLWDLEVQEEILHQEGHSKEVYCIDFQCDGSLVATG
GLDAFGRVWDLRTGRCVMFLQGHLQSVLAINFSPNGYTVATGSGDNSVKIWDLRQRKSVY
NIPAHQNLVSGVKFQGTAGDYLLTCSHDSTAKIWAHPGWSPIATLAGHDSKIMGMDISTD
GQYIATASYDRTFKLWASE
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgtcagaagatgacagtggcccagccttcaagaagcagaaagtgcattatgggacgttg
gaggagacgttaaggaaggaaggaggagatgatgcgatcgcttctggtattcttgcgggt
aatatcaacatatccaaaggtgaaacattcaatttggaggaacatacttctgaacaaaag
aaaaatcttttagcagagtttgccagaaggaaaagggcaagaaccctccatgtgtccact
gatgattctatggtgaaagctaaactaagagaaattggagaaccaatatgcttgtttgct
gaagatgcagcagataggagagaacgattgagacaaaagctttcacaagttggccttact
gaattcaaaggcatcagacaagaagcagaaaaggagaagaaacaaaaagaggaaaataat
aaaacttggtaccatgaaggaccacagagtttaaaatcagctcgtatgtggattgctgaa
tattcgttaccgagagctcagaagagaattgcagagtctcggcttgcagtgaagatacca
gagacagtaagacatgccaagaaacaggagctgcataacagactaaggaatataacagca
attggtagtgagattggtgataccagaccgatttctttctgtaggtttagcccaaattcc
caagtcttagcaatgacttcatggtctggtcttattaaactttggtccgttccagaattc
cagccaattagaacattaagaggccacacgaataacgttggtggtattgcattccatcca
gaggctacggtaggacgggatgaatccatgttttgcatggcatcatgtgcaacagacggc
tctgtcaagttgtggtcaatggacagtgaggaaccacttgcaaacgtggaagggcatgat
gcaagggtggctaggatagagtttcatccctcaggaagatttctaggaacagcatgttat
gataaatcctggagattatgggatttagaagttcaggaagagattctccatcaggaagga
cacagtaaggaagtatactgtattgactttcagtgcgatgggtccctggttgctactggt
ggattggatgcatttggacgtgtatgggacttgcggacagggcgatgtgttatgtttctt
cagggacatttacaatcggtccttgcgataaatttctctcctaatgggtacacagtggca
acgggtagtggagataattctgtgaagatatgggacttgcggcaaaggaagtcagtatat
aacatacctgcacatcaaaacttagtatcaggggtcaaatttcaaggcacagccggtgac
tacctgctaacttgttcccatgatagtacagctaagatctgggcgcaccctggatggtct
cccatagcaaccctggccggtcatgatagtaagataatgggtatggatatctcaacagac
ggacagtacattgcaaccgcctcttacgacagaacctttaaactctgggcatcagaatga

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