Anneissia japonica (feather star): 117122704
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Entry
117122704 CDS
T08613
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03015
mRNA surveillance pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117122704
09123 Folding, sorting and degradation
03018 RNA degradation
117122704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117122704
03041 Spliceosome [BR:
ajc03041
]
117122704
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117122704
mRNA cycle factors
Stress granule specific factors
117122704
Spliceosome [BR:
ajc03041
]
Complex C
Other components
Complex C specific factors
117122704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_10
RBD_DEAH11
RRM_5
RRM_Nup35
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
117122704
NCBI-ProteinID:
XP_033124289
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MNAEGVSNYPIASLYVGDLNPDVTEAMLFEKFSTAGPILSIRVCRDAITRSSLGYAYVQF
EQAADAERALDTMNFDAIKGRPIRIMWSQRDPTLRRTGMGNVFFKNLDKSIDNKALYDTF
SAFGNILSCKIQCDENNESKGYAFVYFETENAASKAISKVNGMLLNGKKVYVGHWIPRKA
RDADMGDKMKSYTNVFIKNLSEDVSDDQLIEMFSKYGKIVSAKVMRDDGAKSRGFGFVSF
EDHEAASQATQQLNNVDVDGRTLYVGRAQKKAERQAELKQKYERLKAERINRFQGVNLYL
KNLDDEIDDKRLQKEFEKFGTITSAKVISDEKGISRGFGFVCFSSPEEAIKAVTEMNGRI
IATKPLYVALAQRKEDRKAQLAAQHMQRIAGIRVPGNAQQVNQVFSPGFGYFTQAVQPPQ
ARLYPAGQMTQIRNQRWTGANQPRPGVIPQSAIRVPAAQGIPTVPAEQRQVKYANAVCNQ
TVASQSTGIPVVSCTNYKDFTRNYK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagaaggagtctcaaactaccctattgcctcactatatgttggagatttgaat
cctgacgttacagaagctatgctttttgagaaattctcaacagctgggcctattttatca
atacgtgtgtgtcgtgatgcgatcaccagaagctctcttggctacgcctacgtacagttt
gagcaggctgcagatgctgagagagcactagacaccatgaactttgatgccatcaaaggg
cgccctattcgtattatgtggtctcagcgtgatccaactttacgtcgtactggcatgggt
aacgtcttctttaaaaacttggacaaatcaattgataacaaagctctctatgatacattt
tcggcttttggtaacatcttgtcttgtaagattcagtgcgatgaaaacaacgaatctaaa
ggctatgccttcgtttattttgagaccgaaaatgctgcctctaaggccatcagtaaagtg
aatggcatgttgctcaatggaaaaaaagtgtatgtaggtcattggattcctcgcaaagcc
cgggatgctgacatgggagataaaatgaagagctacacaaatgtttttataaaaaacttg
agtgaagatgtatctgatgaccagctaattgaaatgttctccaaatatggcaagattgtt
agtgccaaagtaatgcgggacgatggtgctaaaagccgtggcttcggttttgtgagcttt
gaggaccacgaagcagcatcacaggccactcagcagctgaacaatgttgatgtggacggt
cgtactttgtatgttgggcgtgcacagaagaaagcagaacgtcaagctgagcttaaacag
aaatatgaacgactgaaagcagagagaatcaatcgcttccagggtgttaacctttaccta
aagaaccttgatgatgaaattgatgacaagcggttgcagaaagaatttgaaaagtttggt
actattacaagtgcaaaggttataagtgatgaaaagggaatctcaagaggatttgggttt
gtgtgcttttcttcccctgaagaagcaattaaggctgttactgagatgaatggaagaatc
attgctactaaacctctctatgtagcactagcacagcggaaagaagatcgtaaggcacag
ctggctgcccaacacatgcaacgtattgcagggattagagttcccgggaatgcacaacag
gtaaaccaggtgtttagcccagggtttgggtactttactcaagccgttcagcccccacaa
gcacgattatacccagcagggcagatgacccaaatcagaaaccaaaggtggactggtgct
aaccagccaagaccaggagtgatccctcagtctgctatccgtgttcctgccgctcaagga
attccaactgtaccagctgaacaacgccaagtgaagtatgctaatgctgtgtgcaatcag
actgttgctagtcagtctactggaattcctgtggtaagttgtacaaactataaagacttt
acacgcaattataaatga
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