KEGG T08613: 117122795

Anneissia japonica (feather star): 117122795

Entry

117122795         CDS       T08613

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like isoform X1

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

ajc Anneissia japonica (feather star)

Pathway

ajc03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:ajc00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117122795
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajc03021]
    117122795
   03019 Messenger RNA biogenesis [BR:ajc03019]
    117122795
Transcription machinery [BR:ajc03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     117122795
Messenger RNA biogenesis [BR:ajc03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     117122795

SSDB

Motif

Pfam:

zf_CCCH_4 zf-CCCH Torus zf-CCCH_3 zf-CCHC zf-CCCH_2 zf-CCHC_3 zf-CCCH_4 zf-CCHC_2 zf-CCHC_4 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

117122795

NCBI-ProteinID:

XP_033124423

LinkDB

Position

Unknown

AA seq 263 aa
MQHIVASVEDLKFDLEIAIEQQIGSQPLPFPGMDKSCSAVCRFFKFSCVKGQMCPFRHVK
GDKEVVCKHWLRGLCKKGDDCEFLHQFDMTKMPECYFFTKFGMCSNKECPFLHIDPASKV
KDCPWYDRGFCKHGPDCKNRHVRRVMCQNFLNGFCLDGPNCKFVHPSWDIPVMSEQQKEN
MLKITCHTCGEKGHKAQSCPQNPRRPMHVLDENKGSGPQQYNSIPSRSTGTRGNLDHIIC
YKCNERGHFANKCPTNLPMIFAS

NT seq 792 nt +upstreamnt +downstreamnt
atgcaacatattgtagcttctgtcgaagacctaaagttcgatcttgaaattgcaatcgaa
cagcaaatagggtctcagccgcttccttttcctggcatggacaaatcatgttcagctgtc
tgccgtttcttcaagttcagctgtgtaaaaggtcaaatgtgtcctttccggcatgtgaaa
ggtgacaaggaggtcgtgtgtaaacattggttacgtggtctttgcaagaaaggcgatgat
tgtgaattcttacatcaatttgatatgaccaaaatgccagagtgttatttttttacaaaa
tttggaatgtgcagtaacaaagaatgtccatttttacatattgatccagcgagtaaggtg
aaagattgcccgtggtatgacagggggttctgtaaacatggccctgattgtaaaaacaga
catgtgaggagggtgatgtgtcagaattttctgaatggtttttgtcttgacggtccaaac
tgtaaatttgtacacccaagttgggatattccagtgatgtcagagcaacaaaaagagaac
atgctaaaaataacatgccacacgtgcggcgagaaaggccacaaagctcaaagttgtccg
cagaatccaagaaggcctatgcatgtgctggatgagaacaagggatcagggccacagcag
tacaacagcataccaagtaggagcacaggtacaaggggaaatctagaccacatcatctgt
tacaagtgtaatgaaaggggacattttgcaaataaatgcccaaccaatttaccaatgatc
tttgcttcatga

DBGET integrated database retrieval system