Anneissia japonica (feather star): 117123211
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Entry
117123211 CDS
T08613
Name
(RefSeq) helicase SKI2W-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117123211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117123211
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117123211
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117123211
mRNA degradation factors
3'-5' decay
Ski complex
117123211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ski2_N
DEAD
ResIII
DEXQc_Suv3
nSTAND3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
117123211
NCBI-ProteinID:
XP_033124954
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MATQVDEAKDLQVADISDNEMMKFRLVQCGLANNIQAVQAKKDDFLPTLTTLPVGPPPIL
KCLESQLAEYLQTPERLPIHAVERAQKFWGREKNVESLFNIGACPLQSTLQVQRNQTTGE
LLGFKEVPLENTGFTAQNSLSMLRQPGPLADAVRGHSTNKPFWPGGLDEPSIEAITESIQ
VSFDDDLLTIPPGFEKGMNFTDGADNKPAPETLKLADLMTLDDEEFDLGNEEESDNETVN
NEGIAVTGADAGDADLLDVLQQADEISRPQENITVEPPKTEWAIKVDVSAPVDDFYKKIP
NMAYQWPFELDVFQKQAVLRLENHESVFVAAHTSAGKTVVAEYAIALSLKHGTKTVYTSP
IKALSNQKYRDFKNTFEDVGLLTGDVQLNDKAACLIMTTEILRSMLYNGSDTIRDLEWVI
FDEVHYISDAERGVVWEEVLIMLPSTVNVILLSATIPNTMEFANWIGRTKQKYIYVISTL
KRPVPLEHFLYTGNSNKTSDQLFLIVDKNNKMDTIGYKKALNAKKDRESKSSQSFGTKGA
RGGFSKNDKNVYLSLVEMLRKKSQLPVVVFTFSKKKCDENSSTLTAVDLTTSSEKSQIQI
FLQKCISRLKGSDRRLPQVLHMSELLKRGIAVHHSGVLPILKEVVEMLFQRGLVKVISIP
V
NT seq
1985 nt
NT seq
+upstream
nt +downstream
nt
atggctacacaagtagatgaggcaaaggatttgcaggtagcagatattagcgataatgag
atgatgaaatttaggctggtacagtgcggattggctaataacatccaagctgttcaagct
aagaaagatgacttcctgcccacactaacaacattgcctgtaggacctcctcctattctt
aaatgcttagagtctcaattagctgagtatcttcaaactcctgaacgactaccgatccat
gcagtggaacgggctcagaagttttggggaagagaaaagaatgttgaaagtttatttaac
attggagcatgccctctacagtccacattacaagttcaaagaaaccagacaacaggagaa
ctactaggcttcaaagaggtgccactagaaaacacaggattcactgctcaaaactcacta
tccatgctcaggcagcctggtccactggcggatgctgtacgcggtcactcaacaaacaag
ccattctggcctggaggtcttgatgagccgtctatcgaggccatcacagaatctatccaa
gtcagttttgatgatgatctattgacaattcctcctggtttcgagaagggtatgaacttc
acagatggagctgacaataaaccagctcctgaaaccctgaaacttgctgaccttatgacc
ttagatgatgaggagtttgaccttggaaatgaggaagaaagtgacaatgaaactgtaaat
aatgaaggtattgcagtcacaggagctgatgctggagatgctgatttgttagatgtcctt
caacaggctgatgaaatatccaggcctcaggagaatataacagtggaacctcctaaaaca
gagtgggccataaaggtggatgtgtctgctccagttgatgatttctacaagaagattcca
aacatggcctatcagtggccattcgagttggatgtgttccagaagcaagcagtccttcgt
ctggaaaaccatgagagcgtgtttgtggcagctcacacttcagctggcaagacagtcgta
gcagagtatgccattgctctgtctttgaaacacggaacaaaaactgtgtatacatctcct
atcaaggcattatccaatcagaagtatcgggattttaaaaacacatttgaagatgttgga
ctgttgactggtgatgtccagctgaatgataaagcagcctgtctcataatgaccacagag
atcctcaggtctatgttgtacaatggatcagacaccataagggacttggaatgggtcata
tttgatgaagttcattacatcagtgatgcagagagaggagttgtatgggaagaggtgctg
attatgttgcccagtactgttaatgttatcctactcagtgctacaataccaaacacaatg
gaattcgctaattggattgggaggacgaaacagaaatacatatatgtgattagtactttg
aaacgtcccgtaccgctggaacattttttatacacaggcaacagtaataaaactagtgat
caactttttttgattgtcgacaaaaataacaagatggatacaatcggttacaagaaagca
ttgaatgctaagaaggatagagagagcaagtcatcacagagctttggaactaaaggtgca
aggggtggattctcaaagaatgacaagaatgtatatttatctcttgttgaaatgcttcgg
aagaaatcccagctaccagttgttgtgtttacgttttccaagaagaaatgcgatgagaat
tcgtcaactctgactgctgtcgacctaacaacgagcagtgaaaaaagccaaatccaaata
tttttacaaaaatgtatcagtcgattgaaaggctctgataggagacttccacaggttctg
cacatgagtgagctgctaaagagaggaatagcagttcatcacagtggtgtcctgccaata
ttaaaagaagtagttgaaatgctgttccaaagaggtttagttaaggtaatttcaattcca
gtttg
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