Anneissia japonica (feather star): 117123438
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Entry
117123438 CDS
T08613
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117123438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117123438
03041 Spliceosome [BR:
ajc03041
]
117123438
03036 Chromosome and associated proteins [BR:
ajc03036
]
117123438
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
117123438
Spliceosome [BR:
ajc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
117123438
Complex B
117123438
Complex C
U2 SnRNP specific factors
117123438
Chromosome and associated proteins [BR:
ajc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
117123438
TFTC complex
117123438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
117123438
NCBI-ProteinID:
XP_033125234
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MFLYNLTLQRSSGVTHAIHGNFSGTKQQEIVVSRGKIIELLRTDPNTGKVYTLLTHEIFG
VVRALMAFKLTGGTKDYIIIGSDSGRIVILEYLPAKNVFDKIHQETFGKSGCRRIVPGQH
LAVDPKGRAVMIGAVEKQKLVYILNRDAQARLTISSPLEAHKSNTFCYHIVGVDVGFENP
MFACLEVDYEEADSDPTGEAAQTTQQMLTYYELDLGLNHVVRKYSEPLEEHGNFLIPVPG
GSDGPSGVLICSENYITYKNLGDQPDIRMPIPRRRNDLDDPERGLIFVCSAAHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVATSMCVLKTGFLFVASEFGNHNLYQ
IAHLGDDDEEPEFSSTMPLEEGDTFFFAPRPLKNLMIVDELESLSPIMSCQIADLANEDT
PQMYAACGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKRVSDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSSSLIGEDSLLQIYPDGIRHIRSDKRVNEWKTPG
KKNIVKCAVNQRQVVIALSGGELVYFEMDPTGQLNEYTERKEMSADVKCMSLASVPAGEQ
RARFLAVGLDDNTVRIISLDQSDCLQPLSMQALPAPAEALCIVEMGGTEAREESGEGGTR
GGLYLNIGLQNGVLLRTVLDSVTGDLSDTRTRYLGSRPVKLFRVMMQGSQAVLAMSSRSW
LSYWYQSRFHLTPLSYESLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSVP
LKFTPRKFVIPPESNNLILIETDHNAYTDTTKAQRKQQMAEEMVEAAGEEERELAAEMAA
AFINEELPDTVFGAPKAGAGMWASVIRLLNPVSGNTLHLIQLEQNESALSLAVCKFGNRG
DEDVFLIVGTAKDMTLSPRTCSGGFLHTYQITENGCNLQLLHKTTVDDVPAAICSFQGRV
LVGVGKLLRIYDLGKKKLLRKCENKMIPNLIVNITTVGNRILVSDIQESFHFVRYKRAEN
KLIIFADDTYPRWITASCILDYNTVVCADKFGNITVVRLPPSINDDVDEDPTGSKALWDR
GLLNGASQKADVICNFHIGETILSLQKSILIPGGSESLVYTTLSGAIGILVPFTSHEDHD
FFQHLEMHMRSEYPPLCGRDHLSFRSYYFPIKSVIDGDLCEQFSSMDPAKQRSVAEELER
TPAEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtacaatctaactttacaaaggtcatcgggagtgacccatgctatccatgga
aacttctccggaacaaaacagcaagaaatagttgtatccagagggaagatcattgagctc
cttcgtaccgacccaaacacaggcaaagtttacacactgcttacccatgagatatttggt
gttgtgagggcgttgatggccttcaagttaactggaggaacaaaagattacatcattatt
ggatcagactctggtagaattgtcattctggagtatttacctgcaaaaaatgtctttgac
aagatccatcaggaaacgtttggcaaaagtggttgtcgacggatcgtgccaggtcaacat
ttagcagttgatcccaaagggcgtgccgtgatgatcggtgccgttgagaaacagaagctg
gtgtacattctgaatcgagatgcccaagcaagacttaccatatcatcaccactggaggct
cacaagtccaacactttttgttatcatatcgttggtgttgatgttggctttgagaatcca
atgtttgcatgtcttgaagttgattatgaggaggctgacagcgacccaactggagaggct
gctcaaaccacacagcagatgttgacttactatgagttggatcttggtctgaatcatgtt
gtcaggaagtacagtgaaccgttagaagaacacggcaattttctcattccagtacccgga
ggcagcgatgggcccagtggggtactcatctgctccgagaattacataacatataaaaac
cttggtgaccaaccagacattcgaatgcccattccaagaaggcgcaacgatcttgatgac
cctgagcgtggtctgatatttgtttgcagtgcagcacataaaacaaaatccatgttcttc
ttcttggctcagacagagcaaggagacatcttcaagataacattagaaacagatgaggat
atggtgactgaaatccgtctgaagtactttgacaccgtgcctgtagcaacttcaatgtgt
gtgctaaaaacaggatttttatttgttgcctccgaatttggaaaccataatttataccaa
atagctcaccttggcgatgatgacgaggagcccgagtttagcagcacaatgcctctggaa
gagggcgacacattcttctttgctccaagaccactcaagaatcttatgattgtggacgaa
ttggaaagtctttcacctataatgtcatgccagattgctgatcttgctaatgaagacact
ccacagatgtatgcagcatgtgggagagggccaagatcatcaatgagggtgctcagacat
ggtttggaggtatctgaaatggccgtgtcagagctgccaggtaacccaaatgctgtgtgg
actgtcaaacgagttagtgatgatgaatttgatgcttatatcattgtgtctttcgtcaac
gctacccttgtcttgtctattggagaaaccgttgaagaggtcacagattctggatttctt
ggaacaaccccaacactttcctcctctctcattggtgaagactcacttttacagatttat
ccagatggcatccgtcatattcgctctgacaaacgtgtaaatgaatggaagacaccggga
aagaaaaacatcgtgaaatgtgcagtaaaccagagacaggtcgtgattgctctttccggt
ggtgaactggtgtactttgagatggatccaactggtcaattgaatgagtatactgaacgg
aaggagatgtcagctgatgtgaagtgcatgagcttagccagtgttcctgctggtgaacag
agagcgaggtttctggctgttggtctggatgacaacactgtcagaattatctctttagac
caatcagattgtctacagccactgagtatgcaggctcttccagcccctgctgaagcgctt
tgtatcgttgaaatgggaggaacagaagctagggaagagtctggtgagggtggtacaaga
ggtgggctgtaccttaacattggattacaaaatggagtattattgaggactgtgttggat
tctgtgactggtgatttatccgacacaagaacacgttatctggggtcacgacctgtcaag
ttgtttagagttatgatgcagggctcacaggctgtgttagcaatgtcgagtcggtcttgg
ttgagttattggtatcagtctcgttttcatctgacgcctttgtcctatgaatcattggaa
tacgcttcagggttcgcatcagagcaatgtccagaaggcattgtagctatctctactaac
actttgagaattttggcattggagaagttaggagctgttttcaaccaagtatctgttcct
cttaaattcacaccaaggaagtttgtgatcccaccagaaagtaacaacttaattctaatt
gaaactgaccacaatgcttatacagacacaacaaaagcgcaacgcaaacagcaaatggca
gaggaaatggtagaggctgccggggaggaagagcgggaactagcagctgaaatggcggca
gcctttattaatgaggaattaccggacacagtattcggagctcctaaagctggggctggc
atgtgggcgtcagttattagattgctgaaccctgtctcgggcaacacacttcatttgatc
caattagaacagaatgaatctgcactcagtctggctgtgtgcaagtttggtaatagaggt
gatgaagatgtgttcttgattgtgggaacggcaaaggacatgacgcttagcccaaggaca
tgttcagggggatttcttcacacataccaaatcacagagaacggctgcaaccttcaacta
ttgcacaagacaactgttgatgatgttcctgctgctatatgttcattccaaggtagagtt
cttgtaggtgttggcaaattacttagaatatatgatctcggaaagaagaaactgctcaga
aaatgtgaaaataagatgattccaaaccttattgtaaacattacgaccgttggcaacagg
attcttgtcagcgacatccaggagagtttccatttcgtgcggtacaaacgagcagaaaac
aagttgataattttcgctgacgatacttacccccgctggatcacagcctcctgcattctg
gactacaacaccgtggtctgtgctgacaagttcggcaatatcacagttgtgagactacct
cctagcatcaatgatgacgtagatgaggatccaaccggttccaaagcattgtgggataga
ggcctgttgaacggcgcatcccagaaggctgatgtgatttgtaacttccacattggtgaa
accatcctgtccctgcaaaagtccatcttgattcctggtggatccgagtcgcttgtgtac
accactctatcaggagctattggaattcttgtgcctttcacatcacatgaggatcacgac
ttcttccagcatctggagatgcacatgaggtcggagtacccaccactatgtggcagagac
catctatcatttagatcttactactttcctatcaaaagtgtcattgatggtgacctttgc
gagcagttcagttcaatggatccggcgaagcaacgaagcgtggcagaagaattggaacgc
acaccagctgaggtatcaaagaaacttgaggatatcaggacacgctatgccttctag
DBGET
integrated database retrieval system
