Anneissia japonica (feather star): 117123508
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Entry
117123508 CDS
T08613
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117123508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ajc03041
]
117123508
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117123508
Spliceosome [BR:
ajc03041
]
Complex C
Other components
Step II factors
117123508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
ATPase_2
ResIII
ABC_tran
AAA_16
AAA_24
T2SSE
AAA_30
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
117123508
NCBI-ProteinID:
XP_033125348
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MESMEDHAVHRLEGSSNQSGGLFIKKSKFKSPKLAKSLLGLDSLAAQKRSEKDVQSTDER
NKSKRKSNREDNDEDVQTEKSQHSSSKRHYRSHRIETPSHTGGVSEAAKEKQRMREDRKW
GGVYASSKEERRHNERKRSKDRDYEQDRHRKRSKEKEHHRKHYNSQRSERSQRSQRSDSG
NYSGRDEPATPRLSRGVVTPSRTSWEDDDDVPRKQSDWDFPTPDRERNQKDRGYSSERKS
HRSFRSERKKDKRNAVDDTPVLTPSYKYNAWADDRKKSGVTPYSKDDYSERRQTTDTDKL
EWEAEQKRLDRQWYGMDEGTDETNNPFSSIPDEYIQKKESEMQKHATKRMSERQRQINKD
VEKWETNRMITSGVVQRVQYDEDFEEENVNKVHLLVHNLVPPFLDGRIVFTKQPEPVVPL
KDGTSDMAVVSRKGSMVVRKHREQKERKKAQHKDWELAGTKLGNIMGIKKTQEKDESGDV
DYKTNQKFAEHMKDKTEAASDFAKKKSLREQREYLPIFAVRQELLNVIRDNNVIVIVGET
GSGKTTQLTQVKNLLIDXSGVYLRAGGRRIRSATTMFSPATSINAVYQKKXLRTYKVLNF
NDNIAXKTLIKYMTDGILLRESLRESDLDHYNAIIMDEAHERSLNTDVLFGLLRDVVARR
HDLKLIVTSATMDADKFANFFGNVPVFEIPGRTFPVDVLFSKNVVEDYVDSAVKQVLQIH
LQGSPGDILVFMPGQEDIEVTCDLITERLGELDDAPQLAILPIYSQLPSDLQAKIFQKAP
GGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVYNPRIGMDALQIYPISQANARQRSG
RAGRTGPGQCYRLYTESAYKKELLRTTVPEIQRTNLANVVLLLKSLGVRDLLQFHFMDPP
PQDNMLNSMYQLWILSALDNTGSLTQIGRQMVEFPLDPALSKMLIVACEMGCSAEVLIIV
SMLSVPSIFFRPKGREEDSDQAREKFAVPESDHLTYLNVYQQWKQHNYSSAWCSDHFIHV
KAMRKVREVRQQLKDIMDQQRMDLTSCGTGWDIIRKCICSAFFHQAAKLKGIGEYANVRT
GMPCHLHPTSALFGMGYTPDYIIYHELVMTSKEYMQCVTSVDGHWLAELGPMFYSVKESG
KSRSEKRQEAKESLVNMEDQMAAASEELKTREEEEELQRKSSIKRMQISTPGRRDVATPQ
RKKTPSSFGL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtatggaagatcatgcggtgcatcgtctagaagggtcgtcaaaccagtccggt
ggtttattcatcaaaaaatcgaaatttaaatctccaaaactggcgaaatctctactagga
ctcgactcattagctgctcaaaagcggagtgagaaagatgttcaaagcacagatgagaga
aataaatccaaaagaaagtctaacagagaagataatgatgaagatgttcaaactgaaaag
agccaacattcatcaagcaaaagacattatcgctcacatcgcattgagacaccatcgcat
accggaggagtgagtgaagcagcaaaggaaaaacaacgcatgcgagaggatagaaagtgg
ggaggagtgtatgcatcatccaaagaagagagaagacacaatgaaagaaaaaggagtaaa
gacagggattatgaacaagatagacacagaaagcgttcaaaggagaaggaacatcacaga
aagcactacaattcacaaaggtcggaaaggtcacaaagaagccagagaagtgattcaggt
aactacagtggaagagatgaacccgcaacaccaaggctttcaagaggtgtagtgacacca
tcaagaacaagctgggaagatgatgacgacgttccacgaaaacagtctgattgggatttt
ccaacgccagatagggagagaaaccagaaagacagaggatacagttctgaacgaaagagc
cataggagttttagatcagaaagaaaaaaggacaagagaaatgctgtggatgatactcca
gtcctgactccaagctataagtacaatgcgtgggcagatgacagaaagaagtctggggtt
accccatacagcaaagatgattactcagagagacgacaaaccacagacactgacaaactt
gaatgggaagcagaacaaaagagacttgacagacaatggtatggaatggatgaaggtacg
gatgaaacaaataacccattttcctccatccctgatgagtacatacagaagaaagaaagc
gagatgcaaaagcatgctacaaagaggatgtcagaaagacaacgacaaatcaataaggat
gttgagaagtgggaaacaaatcgaatgattaccagcggtgtagtacaacgtgtgcaatat
gatgaagactttgaagaagaaaatgtgaataaggttcatttgctggtccataacttagtg
ccacccttccttgatggtagaatcgtgtttactaaacagccagagcctgttgtacccctc
aaggatggtacctctgacatggctgtagtttcaaggaagggttcgatggttgtgagaaag
caccgggagcagaaagaacgcaaaaaagcacaacacaaagactgggagcttgccgggact
aaacttggcaacatcatgggcattaagaaaactcaggaaaaggatgagagtggtgatgtg
gattacaagactaaccagaaatttgctgaacacatgaaggataagacagaagcagcaagt
gactttgccaagaagaaatcgttacgtgaacagcgtgaataccttcctatattcgctgtc
cggcaggagcttctgaatgtaattcgagacaacaatgtcattgtgattgttggtgaaaca
ggttctggtaaaaccactcaattaactcaggtaaaaaatttattgattgattgatcaggg
gtttatttaagagccggcggccggcgcattcgatcggctactacgatgttttcgccggct
acttcaatcaatgctgtctaccagaaaaagtagctacgtacatataaggtattgaacttt
aatgataatattgcttagaagacattgatcaagtacatgactgacggtattcttctacga
gaatcgctacgtgaatctgacttggaccactataacgccatcattatggatgaagctcac
gaacgatctttaaatacagacgtgttgtttggacttttacgagatgttgttgctcgaagg
catgatttgaagttgatagtcacatctgcaactatggatgcagacaagtttgcaaacttt
tttggaaatgttccagtctttgaaatcccgggacgaacattccctgttgacgttctattc
agtaaaaatgtggtagaagattacgttgattcagcagtgaagcaagtgctacagatccac
ctgcagggatcacctggagatatcctagtgttcatgccaggacaagaagacattgaggtc
acctgtgatctcattacagaaagacttggcgagctagatgatgctcctcaacttgccatc
cttccgatttattctcaacttccatctgacctccaagctaaaatcttccagaaagcacca
ggtggcgttagaaaatgtattgtagctacaaatattgctgagacttctcttacagttgat
ggcatcatgtttgtggttgattcagggtactgtaaacttaaagtatataatcctaggatt
ggtatggatgctcttcagatttaccccatcagtcaagcaaatgcaaggcaacgctctggc
agagctggaagaacaggtcctggccagtgttatcgtctttacactgaatcagcatataag
aaggaactgcttaggactactgttcctgaaatacaaagaactaatttagcaaatgttgtt
ttactgctgaaatctttaggagttcgggatcttttacaatttcattttatggatcctcct
ccacaggacaatatgctaaactctatgtaccagctttggattttgagtgccttggataac
acaggaagtttgacacaaattggccgacaaatggttgagtttccacttgatccggccctc
tccaagatgcttatagtggcttgtgaaatgggatgcagtgctgaagttctaattatagtc
tctatgctgtcagttccatcaattttctttcgtcctaaaggacgagaagaggacagtgac
caagctagggagaagtttgcagtacctgaaagtgaccatctaacatatttaaatgtgtat
caacaatggaagcagcacaattattcatctgcttggtgtagtgatcacttcattcatgtg
aaagcaatgcgtaaagttcgtgaggtacggcagcagttaaaagacatcatggaccagcaa
cgcatggacttgacgtcatgcggcacaggttgggatatcattcggaagtgcatctgctca
gcattcttccatcaggcagcaaaactgaagggtattggggagtatgccaatgttcggaca
ggtatgccttgtcatttgcaccccaccagtgcgttgtttggaatggggtacaccccagat
tacatcatctaccacgaacttgtgatgacgtcaaaggagtacatgcagtgcgtaacatca
gtggatggccattggttggctgaacttggaccaatgttttacagtgtaaaagaatctggc
aagtcacggtctgagaagcgacaagaagctaaggaaagtctagtgaatatggaggaccag
atggcagctgcctcagaagagctcaaaacaagagaagaggaggaagaacttcaaaggaag
tcatctataaaaagaatgcaaatatcaacaccaggaaggagagacgttgcaaccccacaa
aggaagaagacgccctcttcatttggattgtga
DBGET
integrated database retrieval system
