Anneissia japonica (feather star): 117123551
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Entry
117123551 CDS
T08613
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117123551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117123551
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117123551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR3_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
ASA1
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
eIF2A
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR41
Tricorn_2nd
Ge1_WD40
PEP5_VPS11_N
PAC11
Beta-prop_WDR11_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
117123551
NCBI-ProteinID:
XP_033125411
LinkDB
All DBs
Position
Unknown
AA seq
865 aa
AA seq
DB search
MHPLQPDNLYSHEMVCPCEMIDNPINAVSTKFVRTATNKIRCPIFCVVWTPEGRRLVTGA
SSGEFTLWNGMTFNFETILQAHDYPIRSMVWSHNNLWLMSGDHMGYVKYWQSNMNNVRMF
QAHVDQAIREITFSPTDSKFATCSDDGSVRVFDFFRCHEERILRGHGADVKCLDWHPQKS
IIVSGSKDSQQPVKLWDAKSGLSLATIHAHKSTVMSAKWNRNGNWLLTASRDHLVKVFDL
RAMKEMSICRGHKKEATCVAWHPYFEDIFASGGSDGSLLYWQVGHEKEVGGIEQAHDSIV
WSLAWHPLGHILCSGSNDHSTKFWTRNRPGDKMRDKYNLNTLPQGMFDDAEYDDDNVTLP
AIPGMGLDQSTKEMQEEEDPAFAAVIPGLDSSAEELAQLKPTPQRKVPYAKPIPADFQRK
WEAKKAPGIAPKEVLDKEVSQGQKVETDKDGTSPTKHSSHTQKSNTPQAASGPTMNSSKK
PQINSGPLQQGPAGKKMPPPTSQPKPGLLGTHPTSVPPSDGPKTGLLGAAPPQPDTPVHD
AGPLGGDVDMRHRLSDVDMRNVPISGLGRPIEGRLDGPPRDGPHRDGPPRDGAPWDGPPR
NGPPRDGPPRDGPPRNGPPRDGLHHNGPPGEGPHFNLPSRDGPHQEGPPRNDPAGPPRDR
DMRSNPPFHDEDLRPFSSGHGEPPRDFDARGFRSPPRDEDLRGARLQPFRGPGQPGTGDH
RHDIPRDMDLRMDNFENNDHRTFMHGGMNKDDHELYHGRLHARGGIHHGGQRPGVGRGEP
EPKHEQRYSIDRAFSQEHDGLPHRGVKRGFNEERERGPGMGRGFPRGGGYQGGRGAPRGG
GPWRNDNMGRGNYRGNYRGGRGRAR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttgcagcccgacaacctttactctcatgagatggtctgtccttgtgaaatg
attgacaatccaataaatgctgtatcaaccaaatttgtacgcacagccaccaacaagatt
cgatgtccaattttttgcgttgtgtggactcctgaaggacgtcgactagtaaccggtgca
tccagcggggagtttacactttggaatggcatgactttcaacttcgaaactatcttacag
gcacacgattatccaattcgttccatggtttggagtcacaacaacctctggttgatgagt
ggagatcacatgggctatgtgaaatattggcagtcaaatatgaacaacgttcgcatgttc
caagcacatgttgaccaagcaataagggaaataacgttttcaccaactgattctaaattt
gctacctgttcagatgatggatctgttagagtttttgatttctttcgctgccatgaggag
aggatcttgagagggcatggtgctgatgtcaagtgtttagattggcatccacagaagagt
ataattgtctcaggaagcaaagacagtcaacaaccagtcaaactgtgggatgcgaagagt
gggttgagcttggctacaatacatgcccacaaaagtactgtcatgtctgccaaatggaat
cgcaacggtaactggttactgacagcttcaagggaccatctggtgaaggtgtttgacctg
cgagcaatgaaagagatgagcatctgcagaggtcacaagaaggaggccacctgtgtagct
tggcatccttattttgaagacatttttgcaagtggtggatcagatggatcactattatac
tggcaagttgggcatgagaaggaagtcggtggaatagagcaagcccacgatagcattgtc
tggagtctggcttggcatcctcttggtcatatactctgctccggatctaatgaccactct
acaaaattttggacacggaatagaccaggtgataagatgagagataagtacaacttaaac
accttgccgcaggggatgtttgatgatgccgagtatgatgatgacaatgtgacactacca
gctattccaggaatgggtctcgatcagagcacaaaggaaatgcaggaagaagaggaccct
gcttttgctgccgttattcctggcctggactcttcagccgaggaacttgcccaactcaaa
ccaacaccccaacgcaaagtaccatatgccaagcctattccggctgattttcaaagaaaa
tgggaagcaaaaaaagctccaggaattgcaccaaaggaagtgcttgacaaggaagtttca
caaggtcaaaaagttgaaactgataaagatggtaccagtcccactaagcacagcagtcac
actcagaaaagtaacactcctcaagcagcctcaggccctacaatgaactcttcaaagaaa
cctcaaattaattcaggtcctttgcagcaaggccctgctggtaaaaaaatgccacctcct
acaagccagcccaaacccggtctgcttggtacacatccaacatctgtaccgccaagtgat
ggtcctaagactggtctcttaggtgcagcacctcctcaaccggacacacctgtacatgat
gctggaccattaggaggtgatgtagacatgcgacataggttgtcagatgtggacatgaga
aatgtacctataagtgggctgggaagacctattgagggtaggcttgatggtccacctagg
gatggtccacatagggatgggccacctagggatggagcaccttgggatgggccacctagg
aatgggccaccaagagatggtccacctagggatgggccacctagaaatgggccacctaga
gatggtcttcatcacaatggaccacctggggaaggcccacattttaatttaccatctaga
gatggtcctcaccaggaggggccaccaaggaatgacccagctggccccccacgtgatcgt
gatatgagatcaaatcctccgtttcacgatgaggatcttcggccattttcttccggtcat
ggtgaaccacctcgtgattttgacgctagaggcttccgcagtcctcctagagatgaagat
ctgagaggtgcaaggcttcaaccgtttaggggtcctggacagccaggaacaggagatcat
cggcatgacattcctcgggatatggacttgagaatggataattttgaaaataatgatcat
aggacttttatgcatggtggaatgaacaaggatgaccatgaattatatcacggacggtta
catgctagaggtggtatccatcatggaggtcagaggccaggggtcggcagaggtgaacca
gagccaaagcatgagcagagatattccattgatcgagccttttctcaagaacatgatgga
ctgccacacagaggggttaaaagaggttttaatgaagagagagaaagaggtccaggaatg
ggaagagggtttcctagaggtggtggatatcaaggtggaagaggtgccccaaggggtgga
ggaccatggaggaatgacaatatgggtagagggaattataggggaaattataggggtgga
aggggaagagcaaggtga
DBGET
integrated database retrieval system
