KEGG   Anneissia japonica (feather star): 117123621
Entry
117123621         CDS       T08613                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03013  Nucleocytoplasmic transport
ajc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117123621
  09122 Translation
   03013 Nucleocytoplasmic transport
    117123621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajc03019]
    117123621
   03041 Spliceosome [BR:ajc03041]
    117123621
Messenger RNA biogenesis [BR:ajc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117123621
Spliceosome [BR:ajc03041]
 Complex C
  Other components
   EJC/TREX
    117123621
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117123621
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_IFT140_1st eIF2A RMC1_N Beta-prop_Vps41 WD40_RFWD3 DSE1_N WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_TEP1_C Tricorn_2nd Beta-prop_WDR75_1st NBCH_WD40 PAC11 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_WDR35_TULP_N CFAP251_N Beta-prop_ELP1_1st TRM82_WD PD40 Beta-prop_ACSF4 Peptidase_S9_N PROPPIN Beta-prop_RIG_1st DPPIV_N WD_LRWD1 Beta-prop_DCAF4 TP_0598_N
Other DBs
NCBI-GeneID: 117123621
NCBI-ProteinID: XP_033125512
LinkDB
Position
Unknown
AA seq 320 aa
MATYIEDMQKYFQSNGRTKEMSPHNAKVHSVAWSCDGRMLASGSFDKTVGLFTLDKDKMR
LETTYRGHNDSVDQLCWHPSNPDQFVTASADKTIRIWDARSSKTVATVNTKGENINICWS
PDGHTIAVGNKEDLVTFIDARTHRTRAEEQFKYEVNEISWNNTNDLFFLTNGHGCINILS
YPELKPLTTLRAHPANCICIEFDPTGKYFATGSADALVSLWDVDELVCVRTFSRLDWPVR
TISFSHNGKLLASASEDLLIDIADVETGEKVAEVAIEAPSFTIAWHPSRYLLAFACEDKD
KYNRDRDAGTVKLFGLPSDN
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcgacttacattgaggacatgcaaaaatattttcagagtaatggaagaacgaaggaa
atgtctccacacaatgccaaagtgcattctgtagcgtggagctgtgatggaagaatgcta
gcatctgggtctttcgataaaaccgttggtttatttacgttggataaggataaaatgaga
cttgaaacaacctaccgaggtcataatgacagtgtggaccaattatgttggcatccttca
aatcctgaccagtttgttacagcttcagcagacaaaaccattcgaatatgggatgccaga
tcttccaagacagttgctactgtaaataccaaaggagaaaatattaatatctgttggagt
ccagatggccatactattgccgttggcaataaggaagacttggtaacatttatcgatgct
aggacgcacaggactagagctgaggaacagtttaagtatgaggtcaatgagatttcatgg
aacaataccaatgaccttttcttcttgacaaatgggcatggctgtattaatatacttagt
tacccagagttgaagcctttgacaacgcttcgagcccaccctgccaattgcatatgtata
gagtttgatccgacaggtaaatactttgcaacaggtagtgcagatgctcttgttagcctc
tgggacgttgacgaacttgtatgtgtccgcacgttctccaggttggattggcctgtgagg
accataagtttcagtcataatgggaaactgttggcatctgcatcagaagatttgttaatt
gatattgctgatgttgaaacaggagaaaaagttgcagaagttgctattgaagcaccctct
ttcaccattgcttggcatccatcacgatatttacttgcttttgcttgcgaagataaggac
aaatacaatcgggatagagatgcaggaacggtcaaactctttggcttgccaagtgataat
tga

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