Anneissia japonica (feather star): 117123621
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Entry
117123621 CDS
T08613
Name
(RefSeq) THO complex subunit 3-like
KO
K12880
THO complex subunit 3
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03013
Nucleocytoplasmic transport
ajc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117123621
09122 Translation
03013 Nucleocytoplasmic transport
117123621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajc03019
]
117123621
03041 Spliceosome [BR:
ajc03041
]
117123621
Messenger RNA biogenesis [BR:
ajc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117123621
Spliceosome [BR:
ajc03041
]
Complex C
Other components
EJC/TREX
117123621
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117123621
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_NOL10_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
eIF2A
RMC1_N
Beta-prop_Vps41
WD40_RFWD3
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_TEP1_C
Tricorn_2nd
Beta-prop_WDR75_1st
NBCH_WD40
PAC11
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_EIPR1
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
CFAP251_N
Beta-prop_ELP1_1st
TRM82_WD
PD40
Beta-prop_ACSF4
Peptidase_S9_N
PROPPIN
Beta-prop_RIG_1st
DPPIV_N
WD_LRWD1
Beta-prop_DCAF4
TP_0598_N
Motif
Other DBs
NCBI-GeneID:
117123621
NCBI-ProteinID:
XP_033125512
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MATYIEDMQKYFQSNGRTKEMSPHNAKVHSVAWSCDGRMLASGSFDKTVGLFTLDKDKMR
LETTYRGHNDSVDQLCWHPSNPDQFVTASADKTIRIWDARSSKTVATVNTKGENINICWS
PDGHTIAVGNKEDLVTFIDARTHRTRAEEQFKYEVNEISWNNTNDLFFLTNGHGCINILS
YPELKPLTTLRAHPANCICIEFDPTGKYFATGSADALVSLWDVDELVCVRTFSRLDWPVR
TISFSHNGKLLASASEDLLIDIADVETGEKVAEVAIEAPSFTIAWHPSRYLLAFACEDKD
KYNRDRDAGTVKLFGLPSDN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttacattgaggacatgcaaaaatattttcagagtaatggaagaacgaaggaa
atgtctccacacaatgccaaagtgcattctgtagcgtggagctgtgatggaagaatgcta
gcatctgggtctttcgataaaaccgttggtttatttacgttggataaggataaaatgaga
cttgaaacaacctaccgaggtcataatgacagtgtggaccaattatgttggcatccttca
aatcctgaccagtttgttacagcttcagcagacaaaaccattcgaatatgggatgccaga
tcttccaagacagttgctactgtaaataccaaaggagaaaatattaatatctgttggagt
ccagatggccatactattgccgttggcaataaggaagacttggtaacatttatcgatgct
aggacgcacaggactagagctgaggaacagtttaagtatgaggtcaatgagatttcatgg
aacaataccaatgaccttttcttcttgacaaatgggcatggctgtattaatatacttagt
tacccagagttgaagcctttgacaacgcttcgagcccaccctgccaattgcatatgtata
gagtttgatccgacaggtaaatactttgcaacaggtagtgcagatgctcttgttagcctc
tgggacgttgacgaacttgtatgtgtccgcacgttctccaggttggattggcctgtgagg
accataagtttcagtcataatgggaaactgttggcatctgcatcagaagatttgttaatt
gatattgctgatgttgaaacaggagaaaaagttgcagaagttgctattgaagcaccctct
ttcaccattgcttggcatccatcacgatatttacttgcttttgcttgcgaagataaggac
aaatacaatcgggatagagatgcaggaacggtcaaactctttggcttgccaagtgataat
tga
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