KEGG   Anneissia japonica (feather star): 117123964
Entry
117123964         CDS       T08613                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03022  Basal transcription factors
ajc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117123964
  09124 Replication and repair
   03420 Nucleotide excision repair
    117123964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ajc03021]
    117123964
   03400 DNA repair and recombination proteins [BR:ajc03400]
    117123964
Transcription machinery [BR:ajc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117123964
DNA repair and recombination proteins [BR:ajc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117123964
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-UDP zf-C3HC4 zf-C3HC4_4 zf-RING_4 zf-RING_2 zf-RING_UBOX zf-rbx1 zf-RING_6 TRAF3_RING zf-C3HC4_2
Other DBs
NCBI-GeneID: 117123964
NCBI-ProteinID: XP_033125954
LinkDB
Position
Unknown
AA seq 250 aa
MEQVCPRCKTTKYLNPSLKLMVNVCGHSLCENCVSLLFARQSGVCPQCNTALRRNQFRLQ
QFEDSAIEKDVDIRKRILKDFNKQEDDFEDLRLYNDYLEMVETISGFCGVSSVVLVHNAT
YSQMPASQVLASHMAKMKNEQSAVPVKRPVTQFSSGTKLGGGFQSNFMPVPQTKDPLYVY
EYHEVDYLGPVPPNPEELETEGFMEHVRSATPTSLAGGYTHRLACQRALQDAFSGLFFFP
AKVTETMDVS
NT seq 753 nt   +upstreamnt  +downstreamnt
atggagcaggtgtgccctcgctgtaaaacaacgaaatatttaaacccatcattgaaattg
atggtaaatgtgtgcggacattctttatgtgaaaattgcgtgtcattactgttcgcccgt
caatctggagtatgccctcaatgcaacaccgcactcaggagaaatcaatttcgactccag
cagtttgaagattcagcaatcgagaaagatgtagacatcaggaaaagaattctaaaggat
ttcaacaagcaagaagatgactttgaggatcttagactatataatgattatttagaaatg
gttgaaactattagtgggttttgcggtgtcagcagtgtagtacttgtacacaatgctaca
tactcacagatgccggcttcccaggtgctagcttctcacatggccaagatgaagaatgaa
cagtcagctgtacctgtcaaaaggcctgtcacacagttctcatcagggactaaattgggt
ggaggcttccaaagtaatttcatgccagtgcctcaaaccaaagatcctctttatgtttat
gaatatcatgaggtagattatcttggaccagtaccgccaaaccctgaggaactagaaact
gaagggtttatggagcatgttcgttcagcaactccaaccagtttagcaggtggctacacg
catcgattagcctgccagagagctctacaggatgctttcagcggactcttcttcttcccc
gcaaaggtcacagaaacaatggatgtcagctga

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