KEGG   Anneissia japonica (feather star): 117124599
Entry
117124599         CDS       T08613                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
ajc  Anneissia japonica (feather star)
Pathway
ajc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ajc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117124599
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajc03019]
    117124599
   03041 Spliceosome [BR:ajc03041]
    117124599
Messenger RNA biogenesis [BR:ajc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     117124599
Spliceosome [BR:ajc03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    117124599
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IP5PC_F Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_1st PQQ_3 Beta-prop_IFT122_1st Beta-prop_TEP1_C WDR54 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 117124599
NCBI-ProteinID: XP_033126784
LinkDB
Position
Unknown
AA seq 254 aa
MSVLHAAYKWSDILQKSSKVAWSLSVPSTQDQFSAPETNSIVYNSKDNVLYSGCGDNNIY
TWDLESGSHKSTLSGHTNYVHCLSLFNSSNQLVSSSEDGSVRIWDGRGGKEAQHIIEPYK
NEECCRPHFGRWVSCVSVDPGDDWLVCGGGVALSLWHLRSLSTTCVYNIGNSCAQCVQFY
DDLLYSGGSHAMVSHLTMNGEVKTQVPCTPNSVFSLAINTSSETNKVLSVAGSSSQVDIF
TNFGYRAFSFQAVP
NT seq 765 nt   +upstreamnt  +downstreamnt
atgtccgtcttacacgcagcatacaagtggtctgatattttacaaaagagttcaaaggtg
gcctggtcgttgtcagtaccaagtacacaggatcagttttcagctcctgaaacaaacagc
attgtttataattcaaaggataatgtactctactctggttgtggtgacaacaatatctac
acctgggacttggagtcaggtagccacaagagtacattgtcaggtcatactaactatgtc
cactgcttatctctattcaactccagcaaccaattagtatcctcctcagaagatggctca
gtgagaatatgggatggtagaggtggaaaagaagcccagcatataattgaaccttataaa
aatgaggaatgttgtcgacctcattttggtcgatgggtaagctgtgtgtctgtggatcca
ggtgatgattggctggtttgtggagggggtgtggcactgtcgctttggcatttgaggtcg
ctctcaacaacatgtgtatacaacattggcaactcttgtgcccaatgtgtccagttctat
gatgaccttctatattctggaggaagtcatgcgatggtatcacatcttacaatgaatggt
gaagttaaaacacaggttccgtgtacaccaaacagtgtcttttcattagctataaacaca
tcctctgagacaaacaaggtgctaagtgttgcaggtagcagttctcaagtcgacatcttc
acaaactttggctaccgagccttttcatttcaagccgtcccatga

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