Anneissia japonica (feather star): 117124670
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Entry
117124670 CDS
T08613
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03022
Basal transcription factors
ajc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117124670
09124 Replication and repair
03420 Nucleotide excision repair
117124670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117124670
03400 DNA repair and recombination proteins [BR:
ajc03400
]
117124670
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117124670
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117124670
DNA repair and recombination proteins [BR:
ajc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117124670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
CCDC92
CSTF_C
Motif
Other DBs
NCBI-GeneID:
117124670
NCBI-ProteinID:
XP_033126892
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MGKNKRDRKNEDGRKSKKPKVAEPDYEDDDTQDGNDSGLIPEGAFKKVDEATKQDEYGAK
DYRSVLKLKDDHGSRPLWVAPDGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEYKLT
PYSLYAAVSVGLQTSDIIEYLRRLSKTSIPEGIIEFIKLCTVSYGKLKLVLKHNRYFVES
AFPEVLQKLLKDHEIQACRLREDETLADTDDLIKSQTTIKSALKLNKPATSTAESETVEQ
NGNDKDAIPSDIYDFYDKIDKEDEEGEDLQTVSFEVKQQEIEKLQKRCIELDFPLLAEYD
FRNDTNNPDLNIDLKPTTILRPYQEKSLRKMFGNGRARSGIIVLPCGAGKTLVGVTAACT
VRKRCIVLCTSGVAVEQWRSQFKMWSTVDDTMICRFTSDAKDKPVGCTICISTYSMISHS
SKRSWEAEQVIKWLKSQEWGLMVLDEVHTIPAKQFRRVLTEVQAHCKLGLTATLVREDDK
IADLNFLIGPKLYEANWMELQNNGHIAKVQCAEVWCPMTPEFYREYLSIRNRKRLLVYVM
NPNKFRACQFLVKFHEQRNDKVIVFSDNVFALIHYAKAMEKPFIYGPTTQSERLHILQNF
VHNPAVNTIFISKVGDNSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGAVAEEYN
AFFYTLVSQDTQEMYYSMKRQSFLVNQGYSFKVITKLAGIDEENLKYSTKAEQQTLLQQV
MAATDEDAEEERVAGEMRPGSSQVSRRAGAMSSMSGGDDQVYMPYSKSSKTKVHPLFKKY
RF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaataaaagagacaggaaaaacgaggatggcaggaaatctaagaagccaaag
gtagctgaaccagattatgaagatgatgacactcaggatgggaatgattcaggattaatt
ccagagggggcttttaaaaaggtggatgaggcaactaagcaggatgagtatggagctaaa
gactacaggtcagtgctgaagcttaaagatgatcatggatctagaccgctgtgggtggca
ccggatggccacatctttctggagtccttctcacctgtatacaagcatgctcacgacttc
cttattgcaatttctgagcctgtatgtcgtccagagcatatacacgaatacaagctcact
ccatattcactgtatgcagctgtctccgttggcctacaaaccagtgacatcatagagtat
ctgaggcgccttagtaagacatctattccagagggaatcattgagttcattaagctatgc
actgtgagctatggaaagcttaaacttgttcttaaacacaatcgttactttgttgagagt
gcatttccagaggttttacaaaaattgcttaaagatcatgagattcaggcttgtcgtttg
cgtgaagatgaaacactagcagatacggatgacctgatcaaatcacaaaccaccattaag
tcagcattgaagctcaacaagcctgctaccagcactgccgaatctgaaacagttgaacag
aatggaaatgacaaagatgccattccgagtgatatttatgatttctatgataaaattgat
aaagaagatgaagaaggtgaagatttacaaaccgtgtcctttgaagtaaagcaacaagag
attgaaaaactacaaaaaagatgtattgagttggacttcccactcttagctgagtatgac
ttcaggaacgacacaaacaatcctgacctcaacattgacttaaaacctacaacaatacta
aggccctaccaggaaaagagtctgcgcaagatgtttggtaatggacgtgcaagatctgga
atcattgtattgccatgtggtgccggtaagacccttgttggcgtgacagcggcctgtaca
gtacgtaaacgttgtatcgtcctgtgcaccagtggagtcgcagttgaacagtggaggtca
cagttcaagatgtggtctacagttgatgataccatgatatgcaggttcacctcagatgct
aaagataaaccagtaggttgtacaatatgcattagtacatattccatgatctctcacagc
agtaaacgatcctgggaagctgagcaggtgattaaatggctcaagagccaggagtgggga
ctgatggttttggacgaggtgcatacaattccagccaagcagttcaggagagtattgact
gaagtacaagcacattgcaaactaggcctcactgcaacactcgttagggaggatgacaag
atcgcagatctcaacttcctcatcggtccaaaactgtatgaagcaaattggatggagtta
caaaataatggacacattgctaaagtacagtgtgcagaggtctggtgccctatgacccca
gagttctatcgtgaatacctgagcatcagaaatagaaaacgattgttggtgtatgtaatg
aatccaaataagttccgagcctgtcagtttttggttaaattccacgagcaacgcaacgac
aaagtgattgtgttttcagataatgtctttgctctcatccactatgctaaagccatggaa
aagcctttcatctatggaccaaccactcagtcagaacgtctacacattctacaaaacttt
gtacacaacccagctgtaaatacaatattcatttctaaggttggtgataattcttttgat
cttccggaagctaatgtcctaattcaaatatcctcacatggaggctcacgtcgacaagag
gctcaacgtttgggaagaattctccgcgcaaaaaaaggagctgtagctgaagaatacaat
gcattcttttacacactggtctcccaggatacccaggaaatgtactactcaatgaagcgt
caaagtttcttggttaatcaagggtacagcttcaaggtgatcactaagttagcaggaatt
gatgaggaaaacctaaaatattcaacaaaagcagagcagcagacactgttacagcaggtg
atggctgccacagacgaggatgctgaagaggagagggttgcaggtgaaatgagaccaggc
tcatcacaagttagcagacgggcaggtgcgatgagctccatgtctggtggtgatgaccaa
gtttacatgccctatagcaaatcatccaaaacaaaggttcatccactattcaagaagtac
cgattttag
DBGET
integrated database retrieval system
