Anneissia japonica (feather star): 117125380
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Entry
117125380 CDS
T08613
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ajc
Anneissia japonica (feather star)
Pathway
ajc03022
Basal transcription factors
ajc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ajc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117125380
09124 Replication and repair
03420 Nucleotide excision repair
117125380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajc03021
]
117125380
03036 Chromosome and associated proteins [BR:
ajc03036
]
117125380
03400 DNA repair and recombination proteins [BR:
ajc03400
]
117125380
Enzymes [BR:
ajc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
117125380
Transcription machinery [BR:
ajc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117125380
Chromosome and associated proteins [BR:
ajc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117125380
DNA repair and recombination proteins [BR:
ajc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117125380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
117125380
NCBI-ProteinID:
XP_033127767
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPFDYIYPEQFTYMLELKRALDAKGHCVLEMPSGTGKTISLLSLIVAYL
RTHPTEVTKLIYCSRTVPEIEKVMEELKTLMNYYEQEIGEKPTILGLALSSRKNLCIHPR
VSKEATGKLVDSACQGLTASYIRTRNHYDDSVSVCSFFELFDSIGRDAPIDAGVYNLDDL
KDIGRDRGWCPYFLARYTIMHANIVVYSYHYLLDPKIAELVSKELPKTSVVVFDEAHNID
NVCIDSLSVNITRRTLDRGESNIDYLKGSIERIKETDANKLKREYQRLVEGLRLANEERE
TDAQLANPVLPDEILQEAVPGNIRNAEHFLNFLKRFLEYLKTRLRVQHVVQESPPSFLKD
VYTKVCIERKPLRFCSERLHSLLRTLEFYGNQDLSPLGLIANFATLVSTYGKGFTLIIEP
FDDKAPTIPNPILHFKCMDASVAIKPVFDRFQSVIITSGTLSPLDMYPKILDFRPVSMAS
FTMTLARTCICPLIVGRGNDQVTMTSKFETRQDIAVIRNYGNLLVDLTSIVPDGIVCFFT
SYIYMETIVSKWYEQGIIDNIQKNKLLFIETQDTAETSVALINYQKACENGRGAVLLSVA
RGKVSEGIDFDHHYGRAVVMFGVPYVYTQSRMLRARLEFLRDQYQIRENDFLTFDAMRHA
AQCVGRAMRGKTDYGIMVFADKRFGRGDKRGKLPKWIQEYLSDSVCNLTTDEAIQVSKKF
LRQMAQPFTKEDQLGLSLLTLEQLETEEMQKRVERTAHAI
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaacgttgacggattgcttgtgtactttccctttgactacatctaccctgaa
caattcacctatatgctcgaactaaagcgggcacttgatgcaaagggtcattgtgtgctg
gagatgccttcaggaaccgggaaaaccatatccctcctgtcactcattgttgcctatctt
agaactcatccaacagaagttaccaaacttatatattgttcaagaactgttcctgaaata
gaaaaagttatggaagagttgaaaacattaatgaattattatgaacaagagattggagaa
aaaccaacaattctaggcttggcactcagttcaagaaagaatctctgtatacatccaaga
gttagtaaggaggccacaggcaagctggtggacagtgcctgtcaaggcctaacagcatct
tacatccgtactaggaatcactatgatgattccgtctctgtctgctcattttttgagtta
tttgacagcattggcagagatgctcctatagatgctggcgtttacaacctagatgacttg
aaagatattggccgtgaccgtggatggtgtccttacttccttgcaagatacacaattatg
catgccaacattgtggtgtacagctaccattatttactagatccgaaaatagctgaactt
gtttcaaaagaattgcctaaaacatctgtagttgtatttgatgaggctcataacatagat
aatgtttgtatagattcacttagtgtgaatattacgaggaggacactagatcgtggtgag
agcaacattgattaccttaaaggctctattgagaggattaaagaaacagatgcaaataaa
ctgaagagggagtaccaacgtttagtggaaggtctccgtcttgccaatgaagaacgcgaa
actgatgcacaactcgcaaacccagtactaccggatgaaatattacaagaggcggttcca
ggaaatattcgcaacgcagaacatttcttgaacttcctaaagcgattcttagaatattta
aagactcgattacgtgttcagcacgttgttcaagaaagcccaccatcatttttgaaagat
gtgtacacaaaagtttgcatagaacgtaaaccactgagattctgttcagagcgattacat
tcccttttacgcaccttggaattttatggtaaccaggatctctcccctctaggattaatt
gcaaactttgcaacgttagtcagtacatatggcaaaggttttaccttaattattgaaccg
tttgatgacaaagcccccacaatccctaatcccattcttcacttcaagtgtatggacgcc
tccgttgctattaagcctgtctttgatcgtttccaatctgttataataacctcaggtacg
ctatcccctcttgatatgtatcccaagattcttgattttcgtccagtcagtatggcctca
ttcacaatgaccttagcaagaacttgtatttgcccattgattgttggaagaggaaatgac
caagtcaccatgacatccaaatttgaaacaagacaagatattgctgtaatcagaaattat
gggaatttactggtagatctgacatccattgtgcctgatggaatagtctgtttctttacc
agttatatttatatggagacaatagtttcaaaatggtatgagcagggtataattgacaac
atccagaagaacaagctattgtttatagaaacacaagacacagcagaaacaagtgttgcc
ttgattaactatcagaaagcttgtgagaatggacgtggtgcagtgttgctttccgttgct
cgtgggaaggtttctgaaggaattgattttgatcatcattatggcagagccgttgtcatg
tttggtgtgccgtatgtctatactcaatcacgtatgttgcgagctcgtctggaattcttg
cgagatcagtaccagatccgcgagaatgattttctaacatttgatgcaatgagacatgct
gctcagtgtgttggtagagctatgaggggcaaaactgattatggaataatggtgtttgct
gacaagaggtttgggcgtggcgataaaagaggaaagttacccaaatggatccaagaatat
ttgagcgatagtgtttgcaacttgacaactgatgaagctatacaggtgtcaaagaaattc
ctcagacagatggctcaaccattcacaaaggaggaccaacttggcttgtccttactaact
cttgagcaacttgaaacagaagaaatgcagaaaagagttgaaagaacagctcatgctatc
tag
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integrated database retrieval system
