Aeromonas jandaei: I6H43_05280
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Entry
I6H43_05280 CDS
T07712
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03030
DNA replication
ajd03430
Mismatch repair
ajd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6H43_05280 (dnaE)
03430 Mismatch repair
I6H43_05280 (dnaE)
03440 Homologous recombination
I6H43_05280 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajd03032
]
I6H43_05280 (dnaE)
03400 DNA repair and recombination proteins [BR:
ajd03400
]
I6H43_05280 (dnaE)
Enzymes [BR:
ajd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6H43_05280 (dnaE)
DNA replication proteins [BR:
ajd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6H43_05280 (dnaE)
DNA repair and recombination proteins [BR:
ajd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6H43_05280 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QQB21960
LinkDB
All DBs
Position
complement(1192256..1195735)
Genome browser
AA seq
1159 aa
AA seq
DB search
MADPRFIHLRVHTDFSMVDGLQKINPIVGAAAADNMPAIALTDQMNMCGLVRFYGAAHGK
GIKPIVGADFWVQSDELGDEQFRLTLLAMDNEGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCVAFYQTHFPDAYYLELLRTGRSDEEV
YLHMAVAIATEFELPVVATNEVVFLNADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMCELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVAKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIEHVSD
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKKSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGNEA
ISYPDEKWQHESLKPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAIKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILDARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQRIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LLDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgacccccgttttatccatttgcgagtccacaccgacttctccatggtggatgga
ctgcagaagatcaatcccatcgtcggggctgccgcggccgacaacatgccggcgattgcc
ctgaccgaccagatgaacatgtgtggtctggtgcgcttctatggtgccgcccacggcaag
gggatcaaacccatcgtcggtgccgacttctgggtacagagtgacgagcttggcgacgag
cagttccgcctcaccctgcttgccatggacaacgagggctaccagaacatcaccctgctc
atctcccgcggttatcagcgcggccatgtgcaggggcgtccggtcatcgacaaggcctgg
cttgccgaacacgccaagggggtgatcgtcctctccggcgggcgcgagggggatgtgggc
aagttcctgctcaagggtaaccgccagatgaccgagcagtgcgtcgccttctatcagacc
catttcccggatgcctattacctcgagctgctgcgtaccggccgctctgacgaggaggtc
tatctgcacatggcggtggccattgccaccgagttcgagctgccggtagtggccaccaac
gaggtagtgttcctcaacgccgatgatttcgacgcccacgagatccgggtcgccatccat
gatggctataccctgatggacaagcgccgtccccgtcgctacagcccgcagcagtacctg
cgcagccaggaggagatgtgcgagctctttgccgacatccccgaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgtctcggcgaatatttcctgcccaac
ttcccgaccggcgacatgaccaccgaagattttctggtggccaaatcgaaagagggtctg
gaggagcgtctcgagttcctgttcccggacccggcggtgcgggcagagcgccgtcccgag
tatgacgagcgtctcgatatcgagctgaaagtaatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgttggcccg
ggccgtggctccggtgcaggctctctggtggcctacgccctcaagattaccgacctcgac
ccgctggaatttgacctgctgttcgaacgtttcctcaaccccgaacgggtatccatgccc
gacttcgacgtcgacttctgtatggatcgacgggacgaggtgatcgagcacgtctccgac
atgtatggccgggaggcggtgtcgcagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtgggccgggtgctgggccacgcctacggttttgtcgatcgcatctcc
aagctcattccgccagatcccggcatgaccctggccaaggcgttcgaggccgagcccaag
ctgcccgagctctacgagcaggatgaggaggtcaaggacctcatcgacatggcccgccgc
ttggaaggggtagtgcgcaatgccggtaaacacgccggtggcgtggtaatcgcgcccacc
aagatcaccgactttgcgccgctctactgcgatgacgagggtcatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccggtctggtgaagttcgacttcctcggtctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgtcttgccaaagagggc
aagccgccggtcgacatcgccgctattcccatcgatgacaagaagtcgttcgatttgctg
cagcgctacgagaccacagcggtattccagcttgaatcccgtggcatgaaggacctcatc
aagcggctgcagcccgactgtttcgaagacatgatcgcactggtggccctgttccgaccg
ggcccgctccagtcaggcatggtggataacttcatcgaccgtaaacacggtaatgaagcc
atctcctatccggacgagaagtggcagcacgagagcctcaagcccatccttgagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagacgctggcgggctat
acgctcggtggcgcggacatgctgcgccgggcgatgggtaagaaaaagcccgaggagatg
gccaagcagcgggccggtttcgaagagggcgccatcaagaatggcgtcgacggcgaactg
gcgatgaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaagtcgcac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagactcacttcccggcc
gagttcatggcggcggtcatgaccgccgatatggacaacaccgacaagatcgtgaccctg
gtggacgagtgccagcggatggggctgaccgtgatcccgccggacgtcaacaccggccgc
tatcgcttcagcgtcaacgaagacggtcacatcgtctacggtatcggcgcggtgaagggg
gtgggtgaaggtcccatcgacgcgattctggacgcgcgggatcgggacggcccgttccgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagcttattctctccggcgccatggatcggctcggcccccaccgtgccgccctgatggcg
actctggaagaggcgatgcgcgccgccgagcagcatgccaaggcgcaggcggtggggcag
gtcgacatgttcggcgtgctcaccgaggagatcgacgacgtcaagaaggcgttcgccaat
gtgccgcactggcctgacaaggtgtggctggagggggagcgagaaaccctcgggctctat
ctgaccggtcaccccatcaaccagtacagcggcgaattgcgtcgttatacgtcgggccgg
ttgtgcgatctgcatcctacctcccgcgatacggtgaccacggcggcagggctggtgatt
gccgcccgcagcatggtgaccaagcgcggcaacaagatggggatcttcactctggacgac
cgttccggccgtctcgatgtgacacttttcagcgaagcgctggaaaagtacgaagagttg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagggagcgttttgcc
agagcaattcgcatctcccttgatgaacagcgtatcgatgatcgcttttttccgcgtttg
tgcgagattttggagcccgcccgtgccggagtctgtccggttcaggtaaactatcgtcgc
cccggctcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgttagatgacttgcgcgtcctgcttgggcgagagcgggtcgagttggtttttgattag
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