Aeromonas jandaei: I6H43_06340
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Entry
I6H43_06340 CDS
T07712
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
I6H43_06340 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajd03019
]
I6H43_06340 (orn)
03009 Ribosome biogenesis [BR:
ajd03009
]
I6H43_06340 (orn)
Messenger RNA biogenesis [BR:
ajd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6H43_06340 (orn)
Ribosome biogenesis [BR:
ajd03009
]
Eukaryotic type
Pre-60S particles
RNases
I6H43_06340 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF8174
Motif
Other DBs
NCBI-ProteinID:
QQB21144
UniProt:
A0A7T4AC95
LinkDB
All DBs
Position
complement(1410474..1411019)
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AA seq
181 aa
AA seq
DB search
MTVSAQNLVWIDMEMTGLDPEENVVLEIATIVTDKDLNVLAEGPVIAIHQSDEELAKMDE
WNVNTHTKSGLVDRVKASQHDEAKAVAETLAFIRQWVPERTSPLCGNSIGQDRRFMVKHM
SDLEAFFHYRNVDVSTIKELVRRWQPELLDQFKKSGTHQALDDIRESIAELQFYRSHVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcagcgcgcagaacctggtatggatcgacatggagatgacgggtctcgacccc
gaagagaacgtggtactggagattgccaccatcgtcaccgacaaggacctgaacgtgctg
gccgaagggccggtgatcgccatccaccagagcgatgaagagctggccaagatggacgag
tggaacgtcaacacccacaccaagagcggtctggtggaccgggtgaaggcgagccagcat
gacgaggcgaaagccgttgccgagaccctcgcgttcattcgccagtgggtgccggagcgc
accagcccgctgtgcggcaacagcatcggtcaggatcgccgcttcatggtcaagcacatg
agcgatctggaagccttcttccactatcgcaacgtcgacgtcagcaccatcaaggagctg
gtacgccgctggcagccggaactgctggatcagttcaagaagagcggcacccatcaggcg
ctggacgacatccgcgaatccatcgccgagctgcagttctatcgcagccacgtattcaag
atctga
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