KEGG   Aeromonas jandaei: I6H43_06740
Entry
I6H43_06740       CDS       T07712                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ajd  Aeromonas jandaei
Pathway
ajd02024  Quorum sensing
ajd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ajd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I6H43_06740 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I6H43_06740 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ajd03019]
    I6H43_06740 (hfq)
   03036 Chromosome and associated proteins [BR:ajd03036]
    I6H43_06740 (hfq)
Messenger RNA biogenesis [BR:ajd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     I6H43_06740 (hfq)
Chromosome and associated proteins [BR:ajd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I6H43_06740 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QQB21218
UniProt: A0A2S5FCU8
LinkDB
Position
complement(1475253..1475516)
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARAVNHHQQAAGGAGDEQGDAEA
NT seq 264 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctccaagacccgtttttgaatgcgctgcgccgtgagcggatt
cctgtttctatctatttggtgaacggcatcaaactgcaaggtcaaatcgaatccttcgac
cagtttgtcattctgctgaagaacaccgtgagccagatggtctacaagcacgccatctct
accgtggttccggcccgagccgtcaaccatcatcagcaggctgccggtggcgccggtgat
gaacagggtgatgccgaggcgtga

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