Aeromonas jandaei: I6H43_07840
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Entry
I6H43_07840 CDS
T07712
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6H43_07840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajd03019
]
I6H43_07840
Enzymes [BR:
ajd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6H43_07840
Messenger RNA biogenesis [BR:
ajd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6H43_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
HI1480
Motif
Other DBs
NCBI-ProteinID:
QQB21425
UniProt:
A0A7T4DQA8
LinkDB
All DBs
Position
complement(1701442..1702662)
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AA seq
406 aa
AA seq
DB search
MTFNELALAPALLAALPTDLKHPTRVQQLAIPAVLAGRDLLALARTGSGKTLAFGLPLLQ
RLDPAMSEVQGLVLVPTRELAAQVSGALQGFADALGVRLVTLCGGVAQELQQVELAQGPQ
LLVATPGRLRDLLGQQLLNLAGLRTLVLDEADRLLEMGFWPDIQWLMNGMPVGRQTLLFS
ATLPGELDELAASLLKAPERVEADPRNSVADDIEERLYLVNKSSKVPALISLLKEQAWSQ
VLVFISARDDADGVARKLAKAGIAVAALHGEKEQAVREQALADFKAGNIRVLVATDLMAR
GIHVEALPVVINLDLPASAPVYVHRIGRTARAGRSGFAISLTCHGEADMLTAIRTLTGRE
LPVSELAGFPVTDQPASGEGKRPPRDKQANRRTQAKRSVKQFKGRR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacctttaacgaactcgccctcgcgcccgccctgctggcagccctgccaaccgacctc
aagcacccgacccgggtacagcaactggctatccctgccgtgctggcgggacgggatctg
ctggcgctggcccgcactggcagtggcaagacgctggcgttcggtctgccgctgctgcag
cggctggatcccgccatgtctgaggtacagggtctggtgctggtgccgactcgcgagctg
gccgctcaggtgagcggtgcgctgcaaggctttgccgatgcgctgggcgtgcggctggtg
accctgtgtggcggggtagcgcaggagctgcaacaggttgagctggcgcaggggccgcaa
ctgctggtggcgacgccggggcgattgagggatctgctgggtcagcaactgctcaatctg
gccgggttgcgcaccctggtactggatgaggcggatcgcctgctggagatgggcttctgg
cccgatatccagtggctgatgaatggcatgccggtcgggcgccagaccctgctattctct
gccaccctgccgggcgagctcgatgagttggcagccagcctgctgaaggcaccggagcgg
gtggaggcggatccccgcaacagcgtggccgacgatatcgaagagcggctctatctggtc
aacaagagcagcaaggtgccagcgctcatcagcctgctcaaggagcaggcgtggtcgcag
gtattggtctttatcagtgcgcgggatgatgccgacggcgtcgccagaaagctggccaag
gcgggtatcgcggtggcggcactccatggcgagaaggagcaggcggtgcgcgagcaggct
cttgctgatttcaaggcgggcaacattcgggtgctggtggccaccgacctgatggcgcgc
ggcatccatgttgaggctctgccggtggtgatcaatctggatctgcccgccagcgccccc
gtctatgtgcaccgcatcggccgtaccgcccgggccgggcgcagcgggttcgccatctcg
ctcacctgtcatggtgaagccgatatgctgactgcgatccgcacccttaccggacgtgag
ttgccggtgagtgagctggccggcttcccggtcaccgaccagccagccagcggggagggc
aagcgcccaccccgcgacaagcaggccaatcgtcgcactcaggccaaacgcagcgtcaag
cagttcaagggccggcgctaa
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