Aeromonas jandaei: I6H43_10365
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Entry
I6H43_10365 CDS
T07712
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6H43_10365 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajd03019
]
I6H43_10365 (rhlB)
Enzymes [BR:
ajd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6H43_10365 (rhlB)
Messenger RNA biogenesis [BR:
ajd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6H43_10365 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QQB21883
LinkDB
All DBs
Position
2243849..2245135
Genome browser
AA seq
428 aa
AA seq
DB search
MSKTHLTTEKFAQMGLEPEVLAGLEAKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLTKPRLVNQPRAIIMAPTRELAVQIYNDADSIAASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQVEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
EFTKGSLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVFRNRQPVNRNMRDRQGGNSNN
RRRPPRKS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaagcaaagggatttcactattgtacgcccatccaggcactgtccctg
ccactgctggtagagggccatgacctcgccgggcaagcacagacaggcaccggcaaaacc
atcgcctttctggccgccaccttcaactatcttcttacccacccgctgaccaaaccccgt
ctggtaaatcaacccagagccatcatcatggcacccacccgggagctggcagtacagatc
tacaacgatgccgacagcatcgccgcatctaccggcctgaaactcggcctcgcctacggt
ggcgaaggttacgacaagcagctggccgtactggagcagggcgtcgacatcctgatcggc
accactggccgcatcatcgactacttcaagtccaaggtgatcgatctgagcaacattcag
gtcgtggtactggacgaagcggatcgcatgttcgatctgggcttcatcaaggacatccgc
ttcctgttccgccgcatgccgcccgccaccgagcgactgagtatgctgttctccgccacc
ctctccctgcgcgtgcaggagctggcctacgaacatatgaaccacccggaacatgtgcag
gtagagccggagcagatgaccggcgtgcggatcaaggaggagctgttctacccctccaac
gaagacaagatgttgctgctgctctccctgatggaagaggagtggccggagaaagccatc
gtcttcgccaacaccaagcatgtctgtgaagacgttcatgcctggctggagaacgacggc
caccgcgttggtctgctgaccggcgacgtgccgcagaagaagcggatgaagatcctggaa
gagttcaccaagggttcgctggacatcctggtcgccaccgacgtcgctgcccgtggtctg
cacatccccgacgtgactcacgtcttcaactatgacctgcccgacgacgccgaagactat
gtacaccgtatcggtcgtaccggccgtgccggcaagagcggtcactccatcagcttggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacccgatcccg
gtcagcaaatatgatcgcgaagcactgctggatgatgtcaccgcgccgaaacgggtgttc
cgcaaccgccagccggtgaaccgcaacatgcgggatcgccagggtggcaacagcaacaac
cgccgtcgtccgccgcgcaaaagctaa
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