Aeromonas jandaei: I6H43_11790
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Entry
I6H43_11790 CDS
T07712
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6H43_11790 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajd03021
]
I6H43_11790 (rpoA)
03400 DNA repair and recombination proteins [BR:
ajd03400
]
I6H43_11790 (rpoA)
Enzymes [BR:
ajd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6H43_11790 (rpoA)
Transcription machinery [BR:
ajd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6H43_11790 (rpoA)
DNA repair and recombination proteins [BR:
ajd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6H43_11790 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QQB18288
UniProt:
A0ABD7EUA4
LinkDB
All DBs
Position
2536814..2537803
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactcttgagccacttgagcgtggctttggtcacacgctgggt
aacgccctgcgtcgtattttgctgtcttctatgcccggttgtgcagttactgaagtcgaa
attgacggtgtactgcatgagtacagcagcaaagaaggtgtacaggaagacattcttgaa
atcctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgcaggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgactggtgccaatgctgaaatc
agcatgcgcctgaaagttcagcgcggtcgcggttatgtgcctgcttctgctcgtgttcac
aacgatgacgaagagcgtccgattggtcgcctgctgctggactccgcgttcagccccatc
gttcgtattgcctacaatgttgaggcagcacgtgtggaacagcgtaccgacttggacaag
ctggttatcgacatggagaccaatggtactctggatcctgaagaagccatccgtcgttcc
gccactattctggctgaacaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaagactcctaacctcggtaagaagtccctg
actgagatcaaggacgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaac
tggccgcccgccagcatcgctgacgagtaa
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