Aeromonas jandaei: I6H43_11900
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Entry
I6H43_11900 CDS
T07712
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I6H43_11900 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajd03400
]
I6H43_11900 (recD)
Enzymes [BR:
ajd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I6H43_11900 (recD)
DNA repair and recombination proteins [BR:
ajd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I6H43_11900 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
SH3_13
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
SRP54
T2SSE
SLFN-g3_helicase
TraI_hel_assoc_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QQB18302
LinkDB
All DBs
Position
2563721..2565784
Genome browser
AA seq
687 aa
AA seq
DB search
MSGTMISTAASAMMVERLKTLALAGRIRQLDLQFARLVADLGGSPELVLGAALTCFELGR
GHVCLPLEMLTAGSLRPFGLDPQQSRDLLVDLADPARWPALFAASPLVGTEQDEGLAPRW
PLRLWHGRLYLTRYHDFELGVARHLRALSERAEWPEISPALSRLFARDYGLVFAALLKAR
LAPDFSARHFIEKYLDLVFPNEVDWPAIEGLLASAQAASDLSKLDTLVPEALCCNGQKLA
AATAAARPFAVISGGPGTGKTTTVAKLLAILVETGLQAGKAPAIRLVAPTGKAAARLTES
IGSALQALDLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHAGNPLHLDLLVVDEASMVD
LPMMARLLDALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGY
RLQGTPAGAPVRDSLCLLAKSWRFDQHSGIGQLARACNSGDATAVESVWGAGFADISLHP
WAGEAYDDLIAQGVAGYGSYLKAARAGEAPAAVFKAFNSFQILCALRDGPFGVLGLNERL
ELALSRAGLIARDGDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDETGRLKVWFEQPDGTL
RALLPSRLPPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDL
YGDRALLAQAVRKKTERYSGLAERLGE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaccatgatcagcaccgcagccagcgcaatgatggttgaacggttgaaaaca
ctggcgctggctggccgcatccgccagctggatctgcaatttgcccggctggtggcagac
cttggcggcagccccgagctggtgctgggggcggcgctcacctgcttcgagctggggcgt
ggccatgtctgcctgccgcttgaaatgttgactgccggatccctgcgcccgttcgggctg
gatccccagcagagccgggatctgctggtggatctggcggatcctgcccgctggcccgcc
ctgtttgcggcaagccccttggttggaaccgagcaggatgaggggctcgccccgcgctgg
ccgctgcggctgtggcacgggcggctctacctcacccgctaccacgattttgaacttggg
gtggcccgccatctgcgcgctttgagcgaacgcgccgaatggccggagatttcaccggct
ctgtcgcggctgtttgcccgcgactacgggttggtgttcgcggcgctgctcaaggcccgc
ctcgcccccgatttctcggcccgccactttatcgagaagtatctggatctggtgttcccg
aacgaagttgattggcccgccatcgaagggctgctggccagcgcgcaggcggcgagcgac
ctgagcaagctggatacgctggtgcccgaggcgctctgttgcaacggccagaagctggct
gcggccaccgcggcggcgcgcccctttgcggtgatctccggtggccccggcaccggcaag
accacgactgtggccaaactgctcgccattctggtggagaccggcctgcaagcaggcaag
gcaccggcgatccggctggtggcccccaccggcaaggcggcggcgcgcctcaccgagagt
atcggctctgccctgcaggccctcgatctgccccccgagtgggtggaggcgatccccacc
gaagcgggcaccctgcaccggttgctcggggtcattccggggcgcagccagttccgccac
cacgcgggcaacccgctgcacctcgacttgctggtggtggatgaggcctccatggtcgac
ttgccgatgatggcgcgcctgctcgatgcgctgcccagccacgcccgcctgatcttgctc
ggcgacaaggatcagctcgcctcggtggaggcgggggccgtgctcggcgatatctgcagc
tttatcgaacagggcatcagcccggcgcaggcggactggctctcccgccagaccggctac
cgtttgcagggcacgcccgcgggggcgccggtgcgcgacagcctctgtttgctggccaag
agctggcgctttgatcagcactccggcatcggccagctggcgcgcgcctgcaacagcggc
gatgccacggcggtggaatcagtctggggcgcaggattcgccgatatcagcctgcacccc
tgggcgggggaggcctacgacgacctgattgcccagggggtcgctggttacggcagctat
ctgaaggcggcccgcgcgggggaagcgcccgccgccgtgttcaaggcattcaacagcttc
cagatcctctgcgccctgcgcgatggcccgttcggggtgctggggctaaacgagcggctc
gaactggccctgtcacgggctggcctgattgcccgcgatggcgactggtatgccggtcgc
ccggtgatggtggtacgcaacgatcacggggtcggcctctacaacggcgatatggggctc
tgcctgcccgacgaaactggccggttaaaggtatggtttgagcagccggacggcacattg
cgcgccctgttgcccagtcggctgccgccccacgagacggtctacgccatgaccatccac
aaatctcagggctcggagtttgcccataccgtgctggtgctgcccgatagccccagcccg
ctgctgacccgcgagctggtctataccggcatcacccgcgccaaggcgcgcctcgatctc
tatggcgatcgcgccctgctggcccaggcggtacggaaaaagaccgagcgttattccgga
ttggcggagaggttgggggagtga
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