Aeromonas jandaei: I6H43_13420
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Entry
I6H43_13420 CDS
T07712
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ajd
Aeromonas jandaei
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ajd03009
]
I6H43_13420 (dbpA)
Enzymes [BR:
ajd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I6H43_13420 (dbpA)
Ribosome biogenesis [BR:
ajd03009
]
Prokaryotic type
rRNA helicases
I6H43_13420 (dbpA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QQB18565
UniProt:
A0A7T4A751
LinkDB
All DBs
Position
complement(2870942..2872321)
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AA seq
459 aa
AA seq
DB search
MNNSEFSSLNLSPALLENLTTLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGL
GLLSSLDVNRLEVQALVLCPTRELADQVATEIRRLASTLPNVKLVTLCGGTPTAPQSATL
SFGAHIAVGTPGRILKHLEQGTLELDSLKTLVLDEADRMLDMGFGEDINRVISHAPRDRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVEALHEESAIEQKLYEVPAGQRLDALTWLLSHY
QPSSCVVFCNTKRACSDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNVIEEY
QQAPMPLGDLDTIGRAIKPLAPQMVTLSIDAGRKTKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKQSVAKAALKRLQEGKIKGRSYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacagcgaatttagcagcctgaacctctcccccgccctgctcgagaacctcacc
actctgggttatctgcagatgaccccgatccaggctcagagcctgcctctggtactcgac
ggcaaagacttgatcgccaaggcaaaaaccggcagcggcaagaccgccgccttcggcctc
ggcctgctctccagcctcgacgtcaaccggctcgaggtacaggcgctggtgctctgcccg
actcgcgaactggcggatcaggtggcgaccgagatccgtcgtctcgccagcaccctgccc
aacgtcaagctggtgaccctgtgcggcggcactccgaccgcaccgcaatccgccaccctg
agctttggcgcccacatcgccgtcggcaccccgggccgcattctcaagcatctggagcag
ggcactctggagctggacagcctcaagacgctggtgctggatgaagcagaccgcatgctg
gacatgggctttggcgaagatatcaaccgggtcatcagccatgccccgcgcgaccggcag
acactgctcttctccgccacctatccggaagggatcgcccagatgagccgcggcgtgcag
cgcaatccggttgaggtaagcgtagaggcgctccatgaagagagcgccatcgaacagaag
ctctatgaagtaccggccggtcagcgcctcgacgccctcacctggctgctgagccactat
cagccaagctcctgcgtggtgttctgcaacaccaagcgggcctgcagtgacgtggctgac
catctggcagccaagggcttctcggcactggcgctgaacggcgatctggagcagcgtgag
cgggatcaggtgctggtgcgttttgccaacggcagcgccaccattctggtcgccaccgac
gtggcggctcgcggcctcgacatcaaggagctgggcgccgtcatcaactacgagctcacc
tatgacccggaagtgcacgtacaccgcatcggtcgtaccggccgcgccggtcagcagggt
ctggccctgagcctctatcagccgaatgaagcgcagcgggtaaacgtcatcgaggagtac
cagcaggcacctatgccgctgggggatctcgataccatcggccgtgccatcaagccgctg
gcgccgcagatggtgaccctctccatcgatgcgggccgcaagaccaaggtgcgcgctggt
gatatcctgggtgccctgaccggtgaaggcggcattgccggcgccgatgtgggcaagatc
cagatctccgagcagtactcctacgtcgcggtcaaacagagcgtggccaaggctgcactc
aagcggctgcaggaaggcaagatcaagggtcgcagctaccgcgcccgcaaactgggctaa
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