Aeromonas jandaei: I6H43_14940
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Entry
I6H43_14940 CDS
T07712
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ajd
Aeromonas jandaei
Pathway
ajd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ajd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
I6H43_14940 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajd03019
]
I6H43_14940 (rnc)
03009 Ribosome biogenesis [BR:
ajd03009
]
I6H43_14940 (rnc)
03036 Chromosome and associated proteins [BR:
ajd03036
]
I6H43_14940 (rnc)
Enzymes [BR:
ajd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
I6H43_14940 (rnc)
Messenger RNA biogenesis [BR:
ajd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I6H43_14940 (rnc)
Ribosome biogenesis [BR:
ajd03009
]
Eukaryotic type
90S particles
RNase
I6H43_14940 (rnc)
Prokaryotic type
rRNA processing factors
I6H43_14940 (rnc)
Chromosome and associated proteins [BR:
ajd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
I6H43_14940 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QQB18840
UniProt:
A0A3N6V5P3
LinkDB
All DBs
Position
3178888..3179559
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AA seq
223 aa
AA seq
DB search
MNIKMNRLQSRLGHVFQDLELLTRALTHRSAGSRHNERLEFLGDSILSLVIADDLFHRFP
QAAEGDLSRMRATLVREKTLAELGREFDLGDHLILGPGELKSGGFRRESILADTVEAVIG
AVYLDSDLETVRTLLLGWYTSRLEEIKPGIEQKDPKTRLQEILQGSRKSLPTYTVTNVKG
EAHNQEFTVQCDVEGLDGPIKGVGTSRRKAEQAAAQQALEKLS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaagatgaacagactgcagtcccgtctcgggcacgtctttcaggatctggaa
ctgctgacccgggcgctgactcaccgcagcgccggttcccgtcacaacgagcgactggag
tttttgggtgactcgattttgagtctggtgattgccgacgatctcttccaccgcttcccg
caagcggcggaaggggatctcagccggatgcgcgccactctggtgcgcgaaaagaccctg
gccgagctggggcgggagtttgacctcggggatcacctgatcctggggccgggcgagctg
aaaagcggtggttttcgccgtgaatcgatcctggctgatacggtcgaggcggtgattggc
gccgtctatctggacagtgatctcgaaacagtacgcactctgctgctgggctggtacacc
agccgtctggaggagatcaagccgggcatcgagcagaaggatcccaagacccgtctgcaa
gaaattctgcagggaagccgcaaatccctgccgacctatacagtgaccaacgtcaagggc
gaagcccacaaccaggagttcaccgtccagtgtgacgtggaaggtctggatggtccgatc
aaaggggtcggcaccagccgccgcaaggccgaacaggccgcggcgcagcaagcattggaa
aaactgtcatga
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