Histoplasma mississippiense: HCAG_00337
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Entry
HCAG_00337 CDS
T02229
Name
(RefSeq) similar to cleavage and polyadenylation specific factor 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_00337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_00337
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
HCAG_00337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
5450342
NCBI-ProteinID:
XP_001543291
LinkDB
All DBs
AA seq
285 aa
AA seq
DB search
MSTVTATALQSSNPPILPQGFSAKQPPTIRLYPLSNYTFGTKETQPEEDPSVLARLKRLE
EHYEKYGMRRTCEGVLVCHEHNHPHVLMLQIANAFFKLPGDYLHHDDDEVEGFKTRLNER
LAPVGSQFSGEGVNDDWEIGDTLAQWWRPNFETFMYPFLPGHVTRPKECKKLYFIQLPKK
KVLSVPKNMKLLAVPLFELYDNTARYGPQLSAIPHLLSRYNFEFVDENDNVVAVTPGEQP
GPDSSGGMPQTKVLLSGEDGAMGEDNKNGVGDQEGDTGMEGVEGQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtaacagcgacggcgctgcagagctccaatccgcctatcctcccacaaggg
ttctccgccaaacaaccacccaccatccgcctctacccgctctcaaactacacattcggc
accaaagagacgcaaccggaagaagacccgtcggttttagcgcggctaaaacggctggaa
gagcactatgagaagtatggcatgcggcggacctgcgagggcgtgctggtctgccatgaa
cataaccatccacacgtactgatgctgcaaattgccaatgcatttttcaagttaccaggc
gactacctgcaccacgatgacgacgaggtggaagggttcaaaacgcgtttgaacgagcgc
ttagctcccgttggctcacagtttagtggtgagggggtaaatgacgattgggaaatcggc
gacacgctggcgcagtggtggcggccgaatttcgagacgttcatgtacccattcctcccc
ggccatgtgacacggccaaaggagtgcaagaagctatatttcatccagttgccgaagaag
aaagttctatccgtcccaaaaaacatgaagctacttgctgtacccctctttgagctgtac
gataacacggcacggtatggaccccagctctcagcgatcccgcacctgctgtcacgatat
aactttgagtttgtggatgagaatgataatgtggttgcggtgacgccgggggagcagccg
ggccctgacagcagcgggggaatgccacagacgaaggtgttattgagcggtgaggatggc
gcgatgggagaagataataagaatggcgtgggggaccaggagggggatacggggatggaa
ggtgttgaggggcagtaa
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