Histoplasma mississippiense: HCAG_00740
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Entry
HCAG_00740 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
aje
Histoplasma mississippiense
Pathway
aje03013
Nucleocytoplasmic transport
aje03015
mRNA surveillance pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_00740
09122 Translation
03013 Nucleocytoplasmic transport
HCAG_00740
03015 mRNA surveillance pathway
HCAG_00740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_00740
03041 Spliceosome [BR:
aje03041
]
HCAG_00740
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
HCAG_00740
TREX complex
HCAG_00740
Spliceosome [BR:
aje03041
]
Complex C
Other components
EJC/TREX
HCAG_00740
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HCAG_00740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
5450420
NCBI-ProteinID:
XP_001543694
UniProt:
A6QTN4
LinkDB
All DBs
AA seq
395 aa
AA seq
DB search
MDRSLDEIIVERPSSNRGRSRTRPRRGNAPRDGVKKVSGLIAPTPTRSLLLSPLAPSSRS
VKAHLNQGLGTLKACSISSQAIKCWPHHLDDLQLTSLIILEQQPFRTERANLDLDWVHDK
FEDDRNTRPSYRDSRARRLDRYSPEPEQPQTGAKLRVSNLHYDLTEDDLEDLFTRIGPIS
ALSLRYDRAGRSEGIAFVTYKRLVDAQNAIREFDGANAKGQPITLTMISATPGRSAGRNP
FDFVEKPKGSLFDRTEKPRTRNSRSLSPEANESADVTTGRGGGRFRRSDVSKPPPDHIDR
YVPGQRSPRRRGDGGRRRRGDARGSQERNGNAAESGRREGNRRPKKTQEELDQEMEDYWG
TTAAPNGNGSGTAAITSSSAAPASAALDDDIDMIE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaagcttggatgagattatagtggaacggccctcctcaaaccgtggccgatct
cgaacccgtcctcgacggggcaatgcgcctcgagatggtgtcaaaaaggtctctggttta
atcgccccaacacctacaagaagtcttcttctttctcctctcgcaccctctagccgctcc
gtaaaggcacacctaaaccaaggcctgggcacgctcaaagcttgctcgatttcctcccaa
gccatcaagtgttggccacatcatctagatgaccttcagctgacctcccttattattctt
gaacaacagccttttagaacagagcgtgccaacctggatcttgactgggttcatgataag
ttcgaagatgacagaaacactcgtccctcgtatcgtgacagccgagcccgtcgtctcgac
cgctattctccagaacccgaacaaccccaaaccggtgccaaacttcgcgtctccaacctg
cactacgacttaacagaagatgatttggaggatctttttactcgcatcggtccaattagc
gcactttccctgcggtacgatcgagctggccgttcagagggaattgcgtttgtgacgtat
aaacgtttagtggatgctcaaaacgccatccgcgagttcgatggcgcgaacgcgaaaggg
caaccgatcactctcacgatgatatcggccaccccaggcagatccgctgggcgaaatccc
tttgacttcgttgaaaagccaaaaggcagcctatttgaccgaactgaaaagccccgcacc
agaaatagtcggagtctcagcccggaagcgaatgaaagcgcagacgtcaccacaggtcgt
ggtggcggacggttccgcagaagcgatgtctctaagcctccgccggaccacatcgatcgc
tacgtcccgggccaacggtcgccaaggcgaaggggcgatggcggaaggcgccggcggggg
gatgcgagaggcagccaagagcgaaatggcaatgcggcagagtcgggccgacgagaagga
aacaggagaccaaaaaagacgcaggaagagctggaccaggagatggaggattactggggt
accactgccgcgcccaatggcaacggcagcggaactgctgccataacatcttcttctgct
gcccctgcatctgctgctctggatgatgatattgacatgattgagtaa
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