Histoplasma mississippiense: HCAG_00751 Help Entry HCAG_00751        CDS       T02229                                  Name (RefSeq) ATP-dependent helicase NAM7   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism aje  Histoplasma mississippiense Pathway aje03013   Nucleocytoplasmic transport aje03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:aje00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     HCAG_00751    03015 mRNA surveillance pathway     HCAG_00751  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:aje03019]     HCAG_00751 Enzymes [BR:aje01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      HCAG_00751     5.6.2.5  RNA 5'-3' helicase      HCAG_00751 Messenger RNA biogenesis [BR:aje03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      HCAG_00751    mRNA cycle factors     Common to processing body (P body) and stress granule      HCAG_00751 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD Viral_helicase1 UvrD-helicase SLFN-g3_helicase Helicase_RecD PIF1 NPHP3_N nSTAND3 AAA_22 ATPase Ribosomal_S13_N AAA_16 PhoH Motif Other DBs NCBI-GeneID:  5449796 NCBI-ProteinID:  XP_001543705 UniProt:  A6QTP5 LinkDB All DBs AA seq 1088 aa AA seqDB search MGNHLVSDSASTINAGDDMSTVDGDESILNMATGPRRRRHDDDEEEISDSFEDDDLESMA SVPVDRASKATTSKPEEDKELPIHSCAYCGIHNPGTVVKCLTCTKWFCSARGNTSSSHIV NHLVRARHKEVQLHPESSLGDTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMP SSKDMNWDTSRWQPLIEDRSFLPWLVSSPSDQEQLRARHLSPQMIAKLEEMWKDNAAATV EDLEKATGVDDEPAPVLLRYDDAYQYQNVFGPLVKIEADYDRKLKEAQSQDGLVVRWDLG LNNKHLASFVLPKLELGDVKLAVGDEMRLKYTGELRPKWDGVGYVIKIPNNQSDEVTIEL RTKGDHKSVPTDCTHNFTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAA GPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQKPLSLIQGPPGTGKTVTSANIIYNLAKI NGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDSNI ELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKFRT VLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILG CAPIRLNVQYRMHPCLSEFPSNMFYDGSLQNGVTESERLLKDVDFPWPVAHNPMMFWSNL GNEEISASGTSYLNRTEAANVEKIVTRFFKAGVKPSSIGIITPYEGQRSYVVSSMQATGT FKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVI LGNPKVLSKHPLWNYLLLHFKEKNCLVEGPLSNLQVSLVQFSRPKQAYRGPQRFQVAYNH ASNMASGMVNGRNGHRGDYHDTGSVASYIPDDVSSVNSSAVGGVPIPSGYPHVFRSFTDS WPHLPRHRRANGSRGKGASSVTGESVAASESDVTGSIVGQGGVSLSGLSIHDMNKQASMS QSDRLKRYVESGSRGEPYKPGPSDNGSIFGGSSASIRVPRGCRGNPADDDDARSVSTAFA SQIGGNYD NT seq 3267 nt NT seq  +upstreamnt  +downstreamnt atggggaatcatctggtttcagactctgcttctacgatcaatgctggagatgacatgtca accgtcgacggagatgaaagtatcttaaatatggcaactgggcctcgaaggcgacgacat gatgatgatgaagaggagatatcagatagttttgaggatgatgatttggaaagcatggct agcgtccctgtggatagagccagcaaggccaccacttccaaacccgaggaagacaaggaa ctaccaattcattcttgcgcatattgtggaattcacaatcccggcactgtagtgaagtgc ttaacttgcactaaatggttttgcagcgcgcgtggcaacacgtcttcctcccatatcgtc aatcacctagttagagcaaggcataaagaagttcaactacaccccgaatcatcacttggt gacacgattctcgaatgctacaactgcgggaccaaaaatgttttccttctgggctttatt cctgctaaatcagacactgttgtggtactgctttgtcgacaaccttgtgctgcgatgcca tcttcgaaagacatgaattgggatacttcgcgctggcaacctcttattgaagaccgctcc tttttgccttggctcgtgagttctccctctgaccaagagcagcttcgcgctcgacatcta agtcctcaaatgattgcgaagctagaggagatgtggaaagacaatgccgcagctaccgtt gaagatctggaaaaagcaactggcgttgatgacgaacctgcgccagttctccttcggtat gacgacgcataccaatatcagaatgtttttggtcctctcgtcaagatcgaagccgactat gatcgcaaattgaaagaggcccaatctcaagatggtctggttgtacgctgggacctggga ctgaacaacaagcatcttgcgagctttgttctcccaaagctagaacttggcgatgtgaag ctagcagttggcgatgaaatgcggcttaaatataccggagagctgcggcctaagtgggac ggcgtgggatacgtcatcaaaatcccgaacaaccagtctgacgaggttactattgaattg cgaaccaagggcgaccataaatctgtccccaccgactgcacacataatttcacagctgac tatgtttggaaagcgacgtcctttgaccgtatgcagctagccatgaaaacatttgctgtt gatgagatgagtgtttcgggctacattttccatcggcttttagggaatgaagttgccgct gggcctatgagaactcaaatgcctaaaaagttcagcgtaccaggcctcccagacctcaac agcagtcaaaccaatgccgttaaaagcgttcttcagaaacctctgagcttgattcaagga cctcctggtactggaaaaactgtcacttctgctaacataatttacaacttagcgaaaata aacggcggccaagtattggtctgcgcaccatctaatgttgcggttgaccaactttgtgaa cgcatccacagaactggcttgaagaccgttcgtgtcactgccaagtctcgagaagatgtg gagtctcctgtgggctttctttctctccacgaacaggtccataacaacgacagcaatatc gaacttgtcaaactcaaccaactgaaggctgagctgggtgagctttccagccaagatgag aagaagttcaaacaactagttcgtgctgcggaaaaggagattttgagcaatgcggatgtt atttgctgtacttgcgttggagctggcgatcctcgcctcgcaaagttcaaattccgaacc gttcttatcgatgagtctacgcagtcagcggagcccgagtgcatgattccactcgtcctg ggatgtaaacaagttgtccttgttggcgaccatcaacagcttgggcctgttatcatgaac aagaaggcggccaaggctggacttaaccaatccctgtttgagcgcttggtcatcctagga tgtgcacctattcggcttaacgtacagtatcgcatgcatccatgtctctccgagttcccg tcaaacatgttctacgatggttccctgcagaacggagttaccgaatcagaacgtcttcta aaagatgttgattttccttggcctgtggcgcacaatccaatgatgttctggtcaaatttg ggaaatgaagaaatttcggcatcagggacgtcatacctcaaccgcacagaagctgccaac gtggaaaaaattgtcaccagatttttcaaggctggcgtaaagccttccagtatcgggatc atcacaccttatgaaggacagcgtagctatgttgtcagctcgatgcaagcgactggcacg ttcaaaaaggagctttacaaagaaattgaagttgcgtcagttgatgcgttccagggccga gagaaagactacatcgtgctctcctgtgtcagatctaacgaccatcaaggaattggattt ttgagtgacccacgtcggcttaatgtcgctcttacgcgtgccaaatatggcctggtcatc ctaggaaacccgaaagttctgtcgaagcatcctctgtggaactatcttctacttcatttc aaagaaaagaactgcctagtagaaggtccattgtcaaacttgcaggtgtctcttgtccag ttcagccgcccgaaacaggcctatcgaggaccacagcgtttccaggtagcctataaccac gcatccaatatggccagtggcatggtcaatggcaggaatggccatcgcggtgactaccac gacacaggatctgtggccagttacatcccagatgatgtctcctcagttaattcgtctgct gttggaggcgttcctattccatctggatatcctcatgtattccggagctttactgactcc tggccacaccttccacgccaccgtcgcgctaacggatctagaggcaaaggtgcgtctagc gttactggcgagtcggtcgcagcttctgagtccgacgtcacgggcagtatcgttggacaa ggaggcgtaagcctctctggtttaagcattcatgatatgaataagcaggcaagcatgagc cagtctgatcgtttgaaacgctatgtcgaatccggcagtcgtggagagccatacaaacct ggacctagtgataacggcagcatatttggaggaagttcggcaagcattcgtgttcctcgt ggctgccgtggtaatccagctgatgacgacgatgctcgcagtgtctcgacagcctttgca agtcaaatcggtggaaactacgactga

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