Histoplasma mississippiense: HCAG_00904
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Entry
HCAG_00904 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aje03016
]
HCAG_00904
Enzymes [BR:
aje01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
HCAG_00904
Transfer RNA biogenesis [BR:
aje03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
HCAG_00904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
5450910
NCBI-ProteinID:
XP_001543858
LinkDB
All DBs
AA seq
310 aa
AA seq
DB search
MGSIPDLPIPISLVSGHYFLFSVDTVTYLRREHHICGVLIGTLPQIPQQNVFLGLPLELM
PEEARLLVVKGVAYIVDDAKVHDDRMQHLTNQDRRRYLQNFEEEGRRAALLQAGRKEQER
EEALKKLELRNTHKPAESLLNQSPVPSQNAIEEGSEEQLFHSSCQSSSSVPAPSRQPLTT
EAVFGITPATSDGLFPKAPPLQPPTFPDVPPSYPLFAHLHAKGYFLSPGLRFGCQYLAYP
GDPLRFHSHFLVVSAEWDEEFDIMNLVAGGRLGTGVKKGFLIGGVESFDDSHVETYPDVV
RTFSFEWAGM
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcattccagacctgccaattcccatatctctggtatccggccattatttcctg
ttctcagtcgacacagtgacatatctccgtcgggagcaccacatttgcggcgtgttgata
gggactcttccacaaattccccagcagaatgtcttccttgggcttcccctggagctcatg
cccgaggaggcaagactacttgtagtaaaaggcgtggcctatatcgttgatgatgccaaa
gtccatgatgatcgcatgcaacacttaactaaccaggaccggcgtcggtacctgcagaac
tttgaggaagaagggcgtcgagcagcacttctacaggctggccgtaaggaacaagaaaga
gaagaagctctcaagaaattagaattgagaaacacacataaaccggcagaatcattactg
aaccagagtcctgtgccttctcaaaatgccattgaagaggggtctgaggaacaactcttt
cacagctcttgtcaaagttcgtcctcagtcccagcaccttccaggcaaccccttactaca
gaagctgtttttggaattactcccgcaacatctgatggcttatttccgaaggctccaccc
cttcagcctcccacttttccagacgttccaccgtcgtatccactttttgcccacttacac
gcgaaagggtatttcctatctcccggactccgttttgggtgccagtaccttgcttatccc
ggtgaccctttacgtttccattcccacttcctagttgtctctgcggagtgggatgaagaa
ttcgacatcatgaacttagttgctggcggtagattgggaactggtgttaagaagggcttt
cttattgggggtgtggagtcattcgacgacagtcatgtcgagacttatcccgatgttgtg
aggacttttagcttcgaatgggctgggatgtga
DBGET
integrated database retrieval system
