Histoplasma mississippiense: HCAG_00961
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Entry
HCAG_00961 CDS
T02229
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_00961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_00961
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HCAG_00961
Spliceosome [BR:
aje03041
]
Complex C
Other components
Step II factors
HCAG_00961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
T2SSE
AAA_30
AAA_19
nSTAND3
GIPC1_GH2
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
5449672
NCBI-ProteinID:
XP_001543915
UniProt:
A6QUA5
LinkDB
All DBs
AA seq
1226 aa
AA seq
DB search
MDDLESLELFSLVSKVTTELQNHLGVNDKTLAEFVIDQHLKCSSLAEFRSILDDIGADFP
QSLIESIDRLVLTLHPKFKGKKESAKGTGQNGNSEGLDEVEKKARVFKGLAVPDKVPQWE
DDGGDAATPVEPASKHDATAGAMDDTFAMLEGLAGKARERKSAVNTRKRSRSPGGDEYDG
GISWRDRYRSRSRSQSAERTRRKQEGLDEFGRTSKHRAKNDRYNNGFGENRRRRDHDDEE
FFKRPPTPELDDQPILFKIYDGRVTGIKDFGAFVNLLGVKGKVDGLVHVSAMQVGARVNH
PSDLVSKGQPVKVKVITIQGSRIGLSMKEVDQSTGRDLAPQKRLASGANMERLNGTGSDD
RYGNLSTPVPIIEDDDGRPLKNRKRLNSPERWEIKQLIASGAVSAADYPDIDEEYHATLT
GEGDFEEEEDVDIEVRDEEPPFLAGQTKQSLELSPIRVVKAPDGSLNRAAMAGTNLAKER
RELRQQEAQDKAAEQAAGVDLNVQWHDPMVAPEERKFAADLRNAQVTKTTDTLPEWKRVT
QSKDQSYGKRTNMTMKQQRESLPVFKFRKQLLEAVTENQLLIVVGDTGSGKTTQLTQYLA
EGGFANNGIIGCTQPRRVAAVSVAKRVSEEVGCRLGAEVGYTIRFEDCTSPETKIKYMTD
GILQREILLDPDLKKYSVIMLDEAHERTISTDVLFGLLKKTIQRRPDLKVIVTSATLDAD
KFSEYFNMCPIFSIPGRTYPVEIMYSREPESDYLDAALVTVMQIHLTEPAGDILLFLTGQ
EEIDTACEILYERMKALGPSVPELIILPVYSALPSEMQSRIFEPAPPGSRKVVIATNIAE
TSITIDQIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRSGRAGRTGPGKCFRLY
TEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYA
LSALDDEGLLTRLGRKMADFPMEPALAKVLIASVEMGCSDEMLTIVAMLSVHSIFYRPKE
KQQQADQKKAKFHDPHGDHLTLLNVYNGWKNSRFSSPWCFENFIQARQMRRVQDVREQLV
TIMERYKHKVVSCGRNTTRVRQALCSGFFRNAARKDPQEGYKTLIEGTPVYMHPSSALFG
KAAEHVIFHTLVLTTKEYMHCTTSIEPKWLVEAAPTFFKVAPTNRLSKRKRAERIQPLHN
RFAGDDDWRLSAQRRQGRGGGGGTWG
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcttgagtccttggagctcttttcccttgtctcgaaagtcaccactgagctc
caaaaccatctcggagttaacgacaaaaccctcgccgagttcgtgatcgaccaacatttg
aaatgcagttcgcttgcagaatttagaagtattctcgatgacatcggagccgatttccca
cagagcttgatcgagagtatagatcgcctggtcttgacgctgcacccaaagttcaagggt
aaaaaggagtccgcaaagggcaccggacagaatggaaacagtgaagggttggacgaagtt
gaaaagaaagcgcgtgtcttcaaaggtctagcggttcctgataaagtgccacagtgggag
gatgatggaggtgatgccgctacacctgtggaacccgcttcgaagcatgatgcgactgcg
ggcgcaatggatgatacttttgcgatgttggaaggtttggcggggaaagcaagagagcgt
aaaagcgcagtgaataccaggaagagaagcaggagccccggtggtgacgaatacgatggg
ggcatatcgtggagggacaggtaccggtcgaggtctagatcacagagcgcagaaaggaca
cggcgaaaacaggagggtctggatgaatttggcagaacttcgaaacacagggctaaaaac
gacagatacaataatggttttggcgaaaacagaaggcggcgggatcacgatgatgaggaa
ttcttcaaacggcctccgacccctgaactcgatgaccaacctattctcttcaagatctac
gatgggagggtcacagggataaaggacttcggtgcatttgtgaacctcttgggcgtcaag
gggaaagttgatggacttgtacacgtatccgctatgcaagtcggtgcacgagttaaccac
ccgtctgaccttgtctccaagggccaacccgttaaggtgaaggttatcactatacagggg
agccggataggcttatctatgaaggaggttgatcagagtactggtcgcgatctcgcgcca
caaaaacgccttgcttccggtgccaatatggaacgactcaatggaactggttcagacgac
cgctatgggaatctgagcacccctgttcccatcatcgaggatgatgatggcagaccattg
aaaaaccgaaagcgcttaaattctccggaaagatgggagataaagcaattaattgcgtct
ggtgccgtttccgctgccgattacccggatatcgacgaagaataccatgccacccttacc
ggagaaggggatttcgaggaggaagaggatgttgatattgaagttagagacgaagaacct
ccgttcctagctggccaaacgaaacaatcccttgaactctccccgattcgtgtcgttaag
gctccagatggctcacttaaccgcgctgctatggctggtacaaatttggccaaggaaaga
agagagctacgccaacaagaagctcaggacaaggctgctgagcaggctgccggagttgac
ctcaatgttcagtggcatgatcctatggtagcaccggaagaaaggaagttcgctgcagat
ctgcggaatgcccaagtcaccaaaacaactgatactttacctgaatggaaaagagtaacg
cagagtaaagaccagtcttatgggaagaggacaaacatgacaatgaaacaacaacgtgaa
agtcttcctgttttcaaattccgcaaacagttactggaggccgtgacggaaaatcagctc
ctaatcgttgttggcgatactgggtctggtaaaactacgcagctaacacaatatcttgcc
gagggtggatttgcaaataacggcatcattggctgtactcagccccgacgtgtagccgca
gtatccgtcgcgaaacgtgtatctgaggaagtcggttgtcgtttaggtgcagaagttgga
tacaccatccgctttgaagactgcactagccccgagacaaagatcaaatatatgacagat
ggtatactccagagagaaattcttcttgaccctgacttgaagaaatattcggttatcatg
cttgacgaggctcacgagcgaaccatcagtactgatgttctcttcggccttctcaaaaag
accattcaacgacgacctgacttgaaggtcatcgttacttcagcaaccctagacgccgat
aaattctcggaatatttcaacatgtgtcccatcttctcgattccgggacgaacctaccct
gtggaaatcatgtactcgagagaaccagaatcggactatttggatgcggctttagtcaca
gttatgcagatacacttgacagaacccgccggagacatcttattattcttaactggtcaa
gaagagattgatactgcctgtgaaatcttatatgaacgaatgaaagcgctagggcctagt
gttcccgaactgatcattttgcctgtctactcagctcttcctagtgagatgcagagtagg
attttcgagcctgcgcctcctggaagtcgaaaggttgtcatcgccacaaatatcgcggaa
acatcaattacaatagaccaaatatactatgtagttgaccctggatttgtaaagcaaaat
gcctatgacccaaaacttggaatggattccctcgttgttacacctatatcgcaggcgcag
gcgaagcagcgatctggacgggccggaagaacgggcccaggtaaatgtttccgtttatat
accgaagcagcgtatcaatcagaaatgcttccaaccactattcccgaaattcagcgccaa
aatctctcacatacaattcttatgttgaaagccatgggcattaacgaccttcttcacttc
gacttcatggaccctcccccaacgaacactatgcttactgcacttgaagaactatacgcc
ctttccgctcttgatgacgaaggtcttctaacgcggctgggaaggaaaatggctgacttc
ccgatggagcctgcattggccaaagtgctaatcgcctccgtcgagatgggttgctcagac
gaaatgctcaccatcgtcgccatgctttcagtgcacagcatattctatcggcccaaggaa
aagcagcaacaagccgatcagaaaaaggcaaaatttcacgacccgcatggcgaccacctc
accctcctaaacgtctacaacgggtggaagaattcacgtttcagcagcccttggtgtttt
gagaacttcatacaggcacgccagatgcgccgcgtgcaagatgtgcgcgagcaactggtc
actatcatggaacgctataaacacaaagtggtctcctgcggacggaacacgaccagagtc
cgacaagcgctctgctcaggattcttccggaacgcggcgcgtaaggacccacaggaaggc
tataagactttgatcgaaggaacgcctgtatacatgcatcctagttccgcgctgtttggg
aaggcggcagaacacgtcatattccacactttggtccttaccacgaaggaatatatgcat
tgtactaccagcatagagccaaagtggctcgtcgaagcagcgcccacattcttcaaagtc
gcgccaaccaaccgtctctcgaaacggaagagagcagaacggatccagccgcttcacaac
cgattcgcaggcgatgatgattggcggttatcagcgcaaagacgccaaggaaggggtggt
gggggtggaacctggggatga
DBGET
integrated database retrieval system
