KEGG   Histoplasma mississippiense: HCAG_00976
Entry
HCAG_00976        CDS       T02229                                 
Name
(RefSeq) pre-mRNA splicing factor cef-1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
aje  Histoplasma mississippiense
Pathway
aje03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_00976
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aje03041]
    HCAG_00976
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_00976
Spliceosome [BR:aje03041]
 Complex B
  Other components
   Prp19 complex
    HCAG_00976
 Complex C
   Prp19-CDC5 complex
    HCAG_00976
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    HCAG_00976
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C
Other DBs
NCBI-GeneID: 5450248
NCBI-ProteinID: XP_001543930
LinkDB
AA seq 793 aa
MPVVKGGVWTNIEDEIVKVAVSKYGLNQWARVSSLLARKTPKQCKARWAEWLDPAIRKIE
WSREEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLERYQKLLDEAEARESDELGLGGPAG
GETAAPSADDVRRLRPGELDPDPESKPARPDTIDLDEDEKEMLSEARARLANTQGKKAKR
KARERQLEESRRLAVLQKRRELKNAGINIKVVTRKKGQMDYNADIPFEKQPAPGFYDTLE
EEARNERQRALFDPRKQQLASKRKGDQEEDPERKRRKNDKSGNSAFAAAAKAGQMQKIRE
AEQSSKRRALVLPSPQVSETELEEIVKMGMAGERASKMAGEEENDGTRGLISNYSTIVGG
TPIRTPRAPAEEDRIANEIRNIKALTETQSSLLGGENTPLHEGGGSTGFEGIAPRKHALV
TPNPMATPFRQAGANGIGATPMKTPMGVGATPLRTPRDNFAINKDASMGTLVGNTPKEMK
LREDFLRRQLSSQLSSLPAPKEVEWELEEMPTEQAEPTGKEVPSEEDAAERDRRNKAAAD
EAAQAEFERQSQVYKRGLPRPSVIKLDTLMENSSNVSDPIQDLITHEMVTLIAHDARKFP
LPGARIEGKAPKLTSFSDAQLAWARAAITSEVTRLPPQQDWQDTFTTSWSSLHESASLLG
LSLYSDDDDYETQEQQMIAAFENVHTSLLASAEQGNKLEKKISLHNGGYQARAKTLRAKI
IEASEALEKARFELDAFRTLQLGEESGIGRRLEGLRDEVTFITRREREAQELYKSRKEEL
ESLEGGVVNGWHR
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccagtcgtcaagggtggagtatggacgaatattgaggatgagatcgtgaaggtagcc
gtgtccaaatatggactgaatcaatgggcgcgagtgtcctcccttcttgccaggaaaaca
ccgaagcaatgcaaagctcgctgggcggaatggctggaccctgctatccgcaagatcgaa
tggtcgcgagaggaagatgaaaaattactccatctggcgaagttaatgcctacacagtgg
cgaacgattgctcctattgtcggaagaacagcgacccaatgtttagaacgataccagaag
ttattggatgaagcagaggcgcgggaatctgatgaacttggcctgggcggccctgctgga
ggtgaaactgctgccccaagtgctgatgatgttagaaggctacggccaggcgaactggac
ccggacccggagtctaaacctgcacgccccgataccatcgacctcgatgaggacgaaaag
gaaatgctcagcgaggcccgtgctcgtcttgcgaatacacaaggaaagaaggccaagcgg
aaagctcgagaacgccaattggaagagtcacgtcgtcttgctgttctacaaaagcgccgt
gagctgaaaaatgccggtatcaacattaaggtcgtcacacggaagaaaggccagatggat
tacaatgcggatattccttttgaaaaacagccagcgcccggtttctacgataccttggaa
gaggaagccagaaatgagcgacaaagagctttgtttgatcctcgaaaacaacagcttgcc
agcaaacggaaaggtgatcaagaagaagatcccgaaaggaaaagaaggaaaaatgacaaa
agtggcaattccgccttcgctgcagctgcaaaggcaggacagatgcagaaaatccgagaa
gcggaacagagtagtaagcgtcgggccctcgtgctcccgtctcctcaagtaagcgaaacc
gaacttgaggagatcgtgaaaatgggcatggcaggagagcgggcaagcaaaatggctggg
gaagaggagaacgatggaacgcggggtttaatcagtaactattctactatcgttggtggc
actcccattcgaacacccagagctccggccgaagaagatcgtattgcaaacgaaatccga
aatatcaaagccttaacggaaacacaatcgtctctactaggtggagaaaatactccatta
catgaaggcggcggctctactggttttgaaggaatcgcgccacggaaacatgcgctcgtt
acaccaaatcccatggccacgccgtttcgccaagctggtgctaacggcataggtgccact
cccatgaaaacgccgatgggcgtaggagccactccactacgcacgcctagagacaacttc
gctatcaacaaggatgctagtatgggaacgcttgttggtaacacgcccaaggagatgaaa
ttgcgtgaggacttcttacggcgccaattaagtagccaactttccagtcttcctgcacca
aaagaagtggagtgggagttggaagaaatgccaacggagcaagcagagccgactggcaaa
gaggtgccttcagaagaggacgcagctgagcgggataggagaaataaagctgctgccgac
gaggcggctcaagcggaatttgaaaggcagagccaggtgtataagcgaggtttaccgcga
cccagtgtgatcaagttggacacgttaatggagaattcaagcaatgtttcagaccctatt
caagacttgattacacacgagatggtcactcttatcgcccatgatgctcgaaaatttccc
ttaccgggtgccaggattgaagggaaagctccgaaattgacctcctttagtgatgcacaa
cttgcttgggcccgtgcagctatcacaagtgaggtgacacgtcttcctccccagcaagat
tggcaggatacttttacgacctcgtggtcttctctccatgaatcagctagccttctgggc
ctttcgctctattccgatgacgatgattatgagacgcaagagcaacaaatgatagccgct
tttgaaaacgtccatacgtctctcctagccagcgcggaacaggggaataagctggagaaa
aagatttcactccacaatggcggatatcaagcgcgggcaaaaactctcagggcaaaaatc
attgaagccagcgaagctctcgaaaaggccagattcgagttggacgctttccggactctt
cagcttggagaagaatcgggtattggtaggagactcgagggcctccgtgatgaagtgacc
ttcatcacccgacgggagcgcgaggcgcaggagctgtacaaatcgcgaaaggaagaacta
gagtcactggagggcggtgtagtgaatggatggcaccggtag

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