Histoplasma mississippiense: HCAG_01173
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Entry
HCAG_01173 CDS
T02229
Name
(RefSeq) similar to DNA lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_01173
Enzymes [BR:
aje01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HCAG_01173
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HCAG_01173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
5450755
NCBI-ProteinID:
XP_001544127
UniProt:
A6QUW7
LinkDB
All DBs
AA seq
616 aa
AA seq
DB search
MAMFDALEADIVIFQETKIQRKDLQDDMVLVNGWDCFFSLPKYKKGPNSICCPIRAEEGI
TGILCLPTSGSNLSSPTSFRDLPEEAQIGGYPTAEQLALSDVDAATLDSEGRCMILEFPA
FVLIGVYCPANRDETRDGFRTGFVNVLDARVRNLATMGKRVIVMGDLNISGSQIDSARAL
EGIRKGTLTDSEFVSSPGSDHCPVFAELKDKVSLDGIEVNMLDILNPKGTFENGQRKREY
SLADTLPLSGRLIPEFCQRRSIKDMLFQQRSQNGSQGSGNAASGVAIPISAHKASSDINL
SAIGRSNIPSPSSTPIATSAEPNTPKRPQKEDDGTTSRPKRLKRSESSATTTKAKGQKTL
KGFFGPKTTPCTTVASADDENDHSKSSATTEGGSPQKGTAIKPPCSSGGCCDSQENGCQQ
SQTAGPPAYDKDNDNSGRVHDPIANKESWSKLFTKKPPPKCDGHDEPCISLVTKKAGINR
GRSFWICSRPLGPTGIKKTGDQWRCDTFIWSSDWNGSGEMHVQGLSSFSTTWGSSHSFPL
VRAGEINVPGMHVFAKEWGPLRLDYNGQGLVSGGWRSWQRSLRARIDVGNGFKVRKEPTL
QPALTLGHVLDTSSNN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcgatgcccttgaagcagacatagtgatcttccaagaaacgaaaattcaa
aggaaagatttgcaagatgacatggtccttgttaatggctgggactgttttttcagccta
cccaagtataaaaagggtccgaactctatatgctgtcccatacgcgcggaagaagggatt
acgggcattctgtgcttgccaacatctgggtctaatttatcgtcaccaacttcgttccgc
gacttgccagaagaagcacagatcggcggctaccctactgctgaacagctggctctttca
gatgtagatgctgccacgcttgattctgagggacgctgtatgatcctggagttcccagca
tttgtcttgattggtgtctactgtccggcgaacagggatgagacaagagacgggtttcgg
acagggtttgtgaatgtgcttgatgcaagagtacggaatctagccactatggggaaacgc
gtcatcgtgatgggagacttaaacatcagcggctctcaaatcgattcggcccgtgctctc
gaagggataaggaaaggtaccctgacagattcggagtttgtatcttcgcccggctccgat
cactgtcccgtttttgccgaattgaaggataaggtgtcattggacgggatagaagtcaac
atgctcgacattctcaacccgaagggcactttcgaaaatggacagcggaagcgggaatac
tccctcgcagatactcttccactttcgggtagattaattcctgaattttgtcagcgaaga
agcattaaagatatgttatttcaacagaggtcacaaaatggttcgcagggtagtggaaac
gctgctagcggtgtagctatccccatttctgcccataaagcctcctccgacatcaacctt
tctgcaatagggaggtcgaatataccttccccgtcttctactccgatagcaacatcagca
gagccaaacactccgaagcggcctcagaaagaggatgatgggacaacctcacgacccaaa
cgtttgaaacggagtgagtcgtcggcaactactacgaaggcgaaggggcaaaaaaccttg
aaaggtttttttggcccgaaaacaactccttgtactacagttgcttctgcagatgatgaa
aatgaccactctaagtcgtcggctacgacagaaggtggcagtccacaaaagggaaccgca
ataaaacctccatgttcatcaggaggttgctgtgactctcaagaaaatggatgtcaacaa
tcacagacggctggcccaccggcatacgacaaagataatgataattccggtagagtgcat
gatccaattgccaacaaggaatcatggtcaaagctcttcacgaaaaagcctccaccgaaa
tgtgatggccacgatgaaccttgcatcagccttgtgacaaaaaaagcgggaatcaaccgc
ggccgatccttttggatatgttcgcggcctttgggacctacgggtattaagaaaacaggg
gatcagtggcggtgcgatacctttatatggtcgagtgattggaatggaagtggtgagatg
catgtacaaggcctatcctcgttcagcaccacatggggatcatctcattctttccccctt
gtgcgagctggtgaaatcaatgtgccaggaatgcacgtttttgccaaggagtggggtcca
cttcgattggactacaatggccagggtttggtcagtggtgggtggcggtcgtggcaacga
tcgttgcgggcccggattgatgttggcaatggatttaaggtgcgtaaggagccgactctt
cagcctgcgctcaccttaggccatgtgttggatacttcgtcaaacaactga
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