KEGG   Histoplasma mississippiense: HCAG_01475
Entry
HCAG_01475        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
aje  Histoplasma mississippiense
Pathway
aje03013  Nucleocytoplasmic transport
aje03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_01475
  09122 Translation
   03013 Nucleocytoplasmic transport
    HCAG_01475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_01475
   03041 Spliceosome [BR:aje03041]
    HCAG_01475
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     HCAG_01475
Spliceosome [BR:aje03041]
 Complex C
  Other components
   EJC/TREX
    HCAG_01475
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    HCAG_01475
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd ANAPC4_WD40 WDR55 Beta-prop_WDR75_1st WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Cytochrom_D1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st CFAP251_N Tricorn_2nd Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_WDR35_TULP_N NBCH_WD40 eIF2A WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_IFT140_1st ASA1 Beta-prop_WDR41 PAC11 Beta-prop_SPT8 TP_0598_N Beta-prop_VPS8 VID27
Other DBs
NCBI-GeneID: 5451043
NCBI-ProteinID: XP_001544428
UniProt: A0ACE4JWF3
LinkDB
AA seq 379 aa
MPPAPSRRMVPKDRFGQLFGSLKIQSYYDPAARGPGSHTIRTLAWNPTGSLIATGSVDRT
LRIWNPERTHVKYSTELRGHSSGIEKVTFNPVKESELASCSSDGTVRFWDVRSKTCISRV
DVGGEAFTMAWTADGSVILVGRKDDTLIPISVESPSTPALQTPSGTTAPANIFKALTLHP
QPVQTNATAFSHSLNTSDLDLFLTTGDGTVKVVSYPSFNLLHTIHAHTSACLSIALSPTS
RYLAVGGSDALISLWDTTDWICKRTVSSANGGAVRGVSWSWDGRFIVGACDEPGCGGSGL
EIFHAETGESVYTIPTGGLGSAAGANGVVGIGSGPGTSVGVPAVAWHPSRYWLAYSVTAD
GMGSSGGGLRIVGAGSGSL
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgcccccagccccatctcgacggatggtcccaaaggaccgatttggccaattgtttggc
agcttgaaaattcagagctattatgaccctgcggcgcgaggtccgggttctcataccatt
cgtacccttgcatggaatccgacaggcagcttgatcgcaaccggctcggtggatcgcacc
ctacgcatctggaaccctgagcgcacacatgtaaagtactcgacggagctgcgtggacat
tcttctggtatagaaaaggttacctttaaccctgtcaaagaatcggaattggcaagctgc
tcgagtgatggaactgtccgtttctgggatgtacggtctaaaacgtgtattagccgcgtg
gatgtaggaggcgaggcatttacgatggcatggactgctgatggaagcgtaatactcgtg
ggcaggaaggatgacacattaatacccatctcagtcgagtctccgtctacccccgctctt
caaacgccttccggaaccactgccccggccaacattttcaaggcactcacgctacatcca
caaccagtccaaaccaacgctaccgcattttcacactctcttaatacttctgatctcgac
ctcttcctcaccaccggtgacggtaccgtaaaagtcgtctcctacccgtcattcaacctc
ctccacacaatccatgcccacacatccgcgtgtctttcaatcgcactcagccctacatcg
cgctacctagccgttggcggaagtgacgctttaatatccctctgggacaccacagactgg
atctgcaaacgcaccgtatcaagtgccaacggcggcgccgtaaggggcgtcagctggagc
tgggacggtcgatttatcgtgggggcttgcgacgagcccggctgtggcggctctgggctc
gagattttccacgctgaaacgggagaaagtgtatataccattcctacaggaggactgggc
tctgcggctggagccaacggggtagttggaattggaagcggccctggaacttcagtcggc
gttcccgctgtcgcttggcacccgtctcgctactggttggcttattctgtcaccgctgac
gggatggggagtagtggtggtgggttaaggattgtcggagcggggagtggatcgttgtga

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