KEGG   Histoplasma mississippiense: HCAG_01496
Entry
HCAG_01496        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
aje  Histoplasma mississippiense
Pathway
aje03020  RNA polymerase
aje03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HCAG_01496
  09124 Replication and repair
   03420 Nucleotide excision repair
    HCAG_01496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aje03021]
    HCAG_01496
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_01496
Transcription machinery [BR:aje03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HCAG_01496
  RNA polymerase III system
   RNA polymerase III
     HCAG_01496
  RNA polymerase I system
   RNA polymerase I
     HCAG_01496
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HCAG_01496
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DUF5816 zf_UBZ HypA FtrD-like Zn_ribbon_DZR_6 DUF2197 DUF7129 DZR DZR_2 zf-C2HC_3 Zn_ribbon_10 Zn_ribbon_6 DUF7577 DUF1451 Zf_2nd_IFT121 Fin Zn_ribbon_8 DUF5817
Other DBs
NCBI-GeneID: 5450190
NCBI-ProteinID: XP_001544449
UniProt: A6QVT9
LinkDB
AA seq 75 aa
MSREAYKVPTGQTGYTGATGIVEGTTNDAVSVTYVCGDCNSRVSMKRGDQIRCKECGHRV
LYKERTKRMVQFQAR
NT seq 228 nt   +upstreamnt  +downstreamnt
atgtctcgcgaagcctacaaagttcccacaggccaaactgggtatactggcgcaaccggt
atcgtcgaaggaaccaccaacgatgcggtttccgtaacctatgtctgtggtgattgcaac
tcccgcgtctccatgaagcgtggggatcagatccgctgcaaggaatgtgggcatcgtgtg
ctgtataaggagaggactaagagaatggtgcagtttcaagcccgatga

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