Histoplasma mississippiense: HCAG_01528
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Entry
HCAG_01528 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aje
Histoplasma mississippiense
Pathway
aje03022
Basal transcription factors
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HCAG_01528
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_01528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_01528
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_01528
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HCAG_01528
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HCAG_01528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF5357
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
5449721
NCBI-ProteinID:
XP_001544481
UniProt:
A6QVX1
LinkDB
All DBs
AA seq
644 aa
AA seq
DB search
MASDGKSITWAPKGSGSGLLPVTINVADITHLQQTPATSPKVMLKVFAQATTINPSAGPS
PNNAPPGATEQYIFSFTSGTNARAEADAIKDALSATIQAIKTGQVPTKESAPAAMAIASA
LSSAAGKPSWDDDSRLIADVELQQSLLKFDPALQRVFMETLRTKAETVSNAQFVSQFWST
RVHLLRAHAIEKSQTRGSYNVLSTLKPRVEDNVTKLNISKEQIQLIFSQHPLVKKVYDEN
VPKLTEQQFWSRFFQSRLFKKLRGERVTDADPTDPILDKYLRVDEYAGRSWTANVPHIID
LEGNEENHSQRQGNRPNFDMRPADMDKVPIIRTLNSLSEKIMANVTPVDADPSAPIGLSE
EAYNELQLRDLREDEELKRITLNVRDQSLFLTETKPAEDEETRIFARQDPHEVLRRLQND
LDSTFPPKNKGGVRLDRIIEPEETDSDNDDDTRNQQKSTKPRKERVGSRSALAAASTQIF
SAIRDRKSQFSSPSATLPETCGLPPAIFDRLTLTHATTTEFLHQFWQAFLSGNPDRAGEI
ASLVESLNRAMDRIKAVADEAEKERQVEIEKLKRHAREVMASTGKNIRPNLKGVEGGGKT
VNALLEPTVKALGKALDEYRKALTQAQQVQVQEGTGGPAAGGEG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggatggaaaatcaattacatgggcacccaaggggagtggttccggtttgttg
cctgtgaccattaacgttgcagatattacacatctccaacaaactcccgcgacgagtcca
aaagttatgctgaaggtattcgcgcaagccaccactattaatcccagcgccggccccagt
cctaacaacgcccctccgggcgcaacggaacagtatatcttttccttcacgtcgggaaca
aacgcacgtgccgaggctgatgcgatcaaagatgccctcagtgcaaccatccaggcaata
aaaacaggacaggtccctacaaaagaaagcgcaccagccgcgatggcgattgcaagtgca
ctatcttcagcagcgggaaaaccatcatgggacgacgatagccgactgattgcagacgtg
gaactacagcaatccctcctgaagtttgatccagccctgcagagagtgtttatggaaacg
cttcgcacgaaggccgaaacagttagtaatgcacaatttgtgtcgcagttttggtcaaca
agagtacatctcctgcgagcgcatgcgattgaaaagtctcaaactcgcgggtcatataac
gtactctcaacgttgaagccgcgggtggaggataacgtgaccaaacttaatatcagcaag
gagcagatccagcttatattcagccagcatccgctggttaagaaggtttacgatgagaat
gtccccaagctaacggagcagcagttctggtcgcggtttttccagagtcggttgtttaag
aagttgcgcggtgagcgggtgacggacgcggatccgactgatccgattctggacaagtat
cttcgtgttgatgagtatgcaggccgttcgtggacggcgaacgtgccgcatattattgat
cttgagggaaatgaggagaatcatagtcagaggcaggggaatagaccgaatttcgacatg
aggcctgccgacatggataaggtgccaattatacggactttgaattcgctaagtgagaag
atcatggcgaatgtcacgccggttgatgcggacccatctgcgccgattggtctgagcgaa
gaggcatacaatgagttgcagcttcgtgatttacgcgaagacgaagagttgaagcgaatc
acattaaacgtgcgtgatcagagcctttttttgactgagaccaaacctgcagaggacgag
gagacccgaatatttgcgcggcaggacccccacgaagttctccgcaggctacagaatgac
ctagactcaactttcccgcccaaaaacaagggtggtgttcggctcgaccgcattattgag
ccggaagaaaccgatagcgataacgatgatgatacccgcaaccagcaaaagagcacgaaa
ccaagaaaagaaagggtcggctccagatccgccctcgctgccgcgtccacccagatattc
tccgctatccgtgaccgcaaatctcaattctcctcaccctccgccaccttgccagaaacc
tgcggcctccccccagccatcttcgaccgcttgactctcacacacgccaccacgaccgaa
ttcctccatcaattctggcaagctttcctatccgggaatccggaccgggccggcgaaatt
gcatctctggtcgagtcattaaatcgcgctatggatcgcatcaaagccgtggcggacgaa
gcggagaaggagcgccaggtagaaattgaaaaactgaaacggcatgccagagaagtcatg
gcgtcgacggggaagaatatccggcccaatttgaagggggtggagggcgggggaaagacg
gttaacgcgcttttagagccgacggtgaaggcattggggaaggcgttagacgagtacagg
aaggccttgacccaggcacaacaggtccaagttcaggagggcacagggggaccagcagca
gggggagaaggatag
DBGET
integrated database retrieval system
